Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., bll6904; probable cation efflux system protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  144 bits (364), Expect = 5e-39
 Identities = 117/436 (26%), Positives = 206/436 (47%), Gaps = 24/436 (5%)

Query: 19  LLSAPIPLVLRQMTVPMIFGLVAILMFNLVDTFFISLLGTQALAAISYTFPVTFAVNCIT 78
           +L AP+   L ++  P + GL A+ +    D + + L+G  ALA I+  FP++  +  ++
Sbjct: 13  MLHAPLLPTLFRLATPNVMGLFAMTIVIGYDGYILGLVGADALAGIALVFPLSMLMLQMS 72

Query: 79  MG-IGVGLSTCIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGAS 137
            G IG   +  + R LG G    A R++   LL+A LL        L     +F  +G  
Sbjct: 73  AGGIGGATTAAVARALGAGQREDAGRLAQQALLIAALLAVLFMGAMLGGGRGIFAAMGGR 132

Query: 138 HELIPLIKEYMVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIF 197
              +     Y    +    ++       + +R  G+   P+ +++   L++  L PLL+F
Sbjct: 133 GPALDAALAYSNALFAGAAVIWFTNVLAAVVRGAGNMLLPSLMLVATALLHLGLSPLLVF 192

Query: 198 GYGPFPELGIQGAAIAS-AFSWLGALIGSLYLLIKREKLLAI---PSLPHLRDDWQQILK 253
           G+GP P +G+ GAA+++   + L A++   +LL +R+  + +   P  P L   W+ IL+
Sbjct: 193 GWGPVPGIGVAGAALSTLTVNALSAVVMVAWLL-RRDGAVHLGRTPWWPRLAL-WRDILR 250

Query: 254 IGTPAALSTAMNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMA 313
           +G PA+LS  ++  S A+    +  +GTAA+A YG   R+E IL+ +     +ALT  +A
Sbjct: 251 VGLPASLSPVISNASIAVATAFVGHYGTAALAGYGVAARLEYILVPIAFGFGTALTAMVA 310

Query: 314 QNLGAQNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAA-------LFSQEQAVRDL 366
            N+GA    R       ++R +     +V  +   + +  A        LF+Q+ AVR  
Sbjct: 311 TNMGAGQATR-------AVRVAWAGGAVVAAITGAIGVATAIAPGLWMNLFTQDAAVRAF 363

Query: 367 LWHYLLVVPVSYGFQGVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGRLY--N 424
              YL +V   YGF G+ + L  A     +       S  RL +  +   W+   ++  +
Sbjct: 364 GADYLNIVGGCYGFFGLGLALFFASQGAGRMFWPLAGSMGRLLILVV-GGWLCVHVFQTS 422

Query: 425 IEGLFIGIAVGNILGG 440
             GLF  IA+  ++ G
Sbjct: 423 ASGLFAVIALSLVVYG 438