Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., predicted multidrug efflux system (RefSeq) from Escherichia coli BW25113

 Score = 95.1 bits (235), Expect = 5e-24
 Identities = 97/431 (22%), Positives = 181/431 (41%), Gaps = 46/431 (10%)

Query: 31  MTVPMIFGLVAILMFNLVDTFFISLLGTQALAAISYTFPVTFAVNCITMGIGVGLSTCIG 90
           + VP+      +L+  ++ TF +S LG  A+A +         +      I +G +  + 
Sbjct: 45  LAVPIFMENACVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVA 104

Query: 91  RLLGQGDGRQAARVSSHGLLLALLLVAAASTL----GLLTIEPLFLLLGASHELIPLIKE 146
             LG+ D R+A   +   L++  L     +TL    G   I+  F+   A+ E+  L   
Sbjct: 105 FSLGKRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIID--FVAGDATTEVKALALT 162

Query: 147 YMVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGPFPELG 206
           Y+ +  L+ P   + + G+ A+R  G+TK P  I     ++N  +  +LI+G   +P LG
Sbjct: 163 YLELTVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSWPGLG 222

Query: 207 IQGAAIASAFS-WLGALIGSLYLLIKREKLLAIPSLPHLRD-----DWQQILKIGTPAAL 260
             GA +    S ++GA+     L I     L I    + +       W +++ IG PA++
Sbjct: 223 FVGAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSIIW-EVMGIGIPASV 281

Query: 261 STAMNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQNLGAQN 320
            + +      L  + ++  GT+ +A       I +++ L   +L SA T    + LG   
Sbjct: 282 ESVLFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSASTIITGRRLGVGQ 341

Query: 321 PARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYLLVVPVSYGF 380
            A++   L      S L    +  +  P +  +A+ ++Q+  V+                
Sbjct: 342 IAQAEIQLRHVFWLSTLGLTAIAWLTAPFAGVMASFYTQDPQVKH--------------- 386

Query: 381 QGVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGR-------LYNIEGLFIGIA 433
              V++++  LNAL  P+ +  W         LPA + G R       +  +      + 
Sbjct: 387 ---VVVILIWLNALFMPIWSASW--------VLPAGFKGARDARYAMWVSMLSMWGCRVV 435

Query: 434 VGNILGGLLGY 444
           VG +LG +LG+
Sbjct: 436 VGYVLGIMLGW 446