Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., Na(+)/drug antiporter from Alteromonas macleodii MIT1002

 Score = 79.7 bits (195), Expect = 2e-19
 Identities = 83/414 (20%), Positives = 158/414 (38%), Gaps = 14/414 (3%)

Query: 34  PMIFGLVAILMFNLVDTFFISLLGTQALAAISYTFPVTFAVNCITMGIGVGLSTCIGRLL 93
           P++   +  ++  + DT          +AA++  F +T  + C   GI + L   I RL 
Sbjct: 19  PLLVAQITQMLMGVSDTIMAGRYSATDMAAVALGFSITVPLLCFIQGIALALPPIISRLQ 78

Query: 94  GQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIPLIKEYMVVWYL 153
           G  +    A  S     L   +  A + L   T E +  L   + EL  +  +Y++    
Sbjct: 79  GNKNLSGIADASQQAGYLVFFVGLAVAGLIPFT-ESIVALFPMAPELFTITVDYVLYVLF 137

Query: 154 TIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGPFPELGIQGAAIA 213
            +P   L     +     G TK    I ++  + N   + L I+G GP P +G  G  IA
Sbjct: 138 AMPGFALYQWLRNYCEGLGKTKPTMIITVIGLMANIVGNYLFIYGVGPLPAMGGAGCGIA 197

Query: 214 SAFSWLGALIGSLYLL-----IKREKLLAIPSLPHLRDDWQQILKIGTPAALSTAMNPIS 268
           +A      LI ++  +     +++  L      P++     +  K+G P A++       
Sbjct: 198 TAIVIYTMLIATVIYVRFAPALQKYNLFGQLYKPNM-VTINRTFKMGLPIAMTILFEVTL 256

Query: 269 GALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQNLGAQNPARSFAGL 328
            +L+ ++L+  G   VAA+       +++ +  MS+  A    +   +G  NP ++    
Sbjct: 257 FSLVALLLAPFGATTVAAHQVALNFSALMFMFPMSIGMAAAIRIGYRIGQNNPRQAKIAA 316

Query: 329 FLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYLLVVPVSYGFQGVVMMLV 388
             ++              +     +  L++ ++AV  L    L+   +      V ++  
Sbjct: 317 RTAILIGFFTAACTASFTLVAKGFIIGLYTSDEAVYTLANALLIYAALFQLSDAVQVISA 376

Query: 389 SALNALHQPLKAFQWSFMRLFVFTLPAA-------WIGGRLYNIEGLFIGIAVG 435
           +AL         F  +F+  ++  LP         WI        G +IG  VG
Sbjct: 377 NALRGYKDTTAMFIITFVSYWLIGLPTGVILGRTNWITAEPMAAAGFWIGFIVG 430



 Score = 34.7 bits (78), Expect = 7e-06
 Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 16/202 (7%)

Query: 24  IPLVLRQMTVPMIFGLVAILMFNLVDTFFISLLGTQALAAISYTFPVTFAVNCITMGIGV 83
           +P+ +  +    +F LVA+L+     T   +       +A+ + FP         M IG+
Sbjct: 244 LPIAMTILFEVTLFSLVALLLAPFGATTVAAHQVALNFSALMFMFP---------MSIGM 294

Query: 84  GLSTCIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIPL 143
             +  IG  +GQ + RQ A++++   +L     AA +    L  +   + L  S E +  
Sbjct: 295 AAAIRIGYRIGQNNPRQ-AKIAARTAILIGFFTAACTASFTLVAKGFIIGLYTSDEAVYT 353

Query: 144 IKEYMVVWYLTIPLL-VLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGPF 202
           +   ++++     L   + +   +A+R   DT     I  ++  + G L   +I G   +
Sbjct: 354 LANALLIYAALFQLSDAVQVISANALRGYKDTTAMFIITFVSYWLIG-LPTGVILGRTNW 412

Query: 203 PELGIQGAAIASAFSWLGALIG 224
               I    +A+A  W+G ++G
Sbjct: 413 ----ITAEPMAAAGFWIGFIVG 430