Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., 60 kDa chaperonin 5 from Xanthobacter sp. DMC5

 Score =  716 bits (1847), Expect = 0.0
 Identities = 372/541 (68%), Positives = 445/541 (82%), Gaps = 1/541 (0%)

Query: 1   MAAKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI 60
           MAAKDV+F  DAR K+L GV+ILA+AVKVTLGPKGRNVV++KSFGAP ITKDGVSVA+EI
Sbjct: 1   MAAKDVKFSVDARDKVLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEI 60

Query: 61  ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI 120
           ELEDKF+N+GAQ+V+EVAS+ ND AGDGTTTATVLAQAIV EG KAVAAGMNPMDLKRGI
Sbjct: 61  ELEDKFENLGAQLVREVASKTNDLAGDGTTTATVLAQAIVKEGAKAVAAGMNPMDLKRGI 120

Query: 121 DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG 180
           D AV A V++L A S        IAQVGTISAN D+ VG  +AEAM+KVG +GVITVEE 
Sbjct: 121 DVAVDAIVKDLAANSRKVTSNDEIAQVGTISANGDAEVGKFLAEAMKKVGNEGVITVEEA 180

Query: 181 QALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGV 240
           +  + ELDVVEGMQFDRGYLSPYFI N E   VE + P+IL+ +KK++ ++ELLPVLE V
Sbjct: 181 KTAETELDVVEGMQFDRGYLSPYFITNAEKMRVEFEEPYILINEKKLAGLQELLPVLEAV 240

Query: 241 AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVV 300
            +++RPLLI+AEDVEGEALATLVVN +RG +KVAAVKAPGFGDRRKAMLQDIAILTGG V
Sbjct: 241 VQSARPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGTV 300

Query: 301 ISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDY 360
           ISEE+G++L+   L  LG+AK+V I KEN+TI+DGAG++A I+ R+AQIR QIE  TSDY
Sbjct: 301 ISEEVGIKLDSVNLSMLGRAKKVVIEKENTTIVDGAGEKADIEARIAQIRAQIETTTSDY 360

Query: 361 DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI 420
           D+EK QER+AKLAGGVAV++VG +TEVE+KEKKDRV+DALHATRAAVEEG+V GGGVAL+
Sbjct: 361 DREKAQERLAKLAGGVAVVRVGGSTEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALL 420

Query: 421 RAASKLSSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNV-RAGEGNYGYN 479
           R+   L  L  DN +Q  GI +  RA++AP RQIV+NAGD+ SVV   +  + +  +GYN
Sbjct: 421 RSIKVLDGLKVDNADQKTGIEIVRRAIQAPARQIVQNAGDDGSVVVGKILESDDYTFGYN 480

Query: 480 AATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAPAMPDMGMGG 539
           A TG Y DM++ GI+DPTKV R+ALQ AASV+GL+ITTEA+I ELPKK  PA P M  GG
Sbjct: 481 AQTGEYVDMVKAGIIDPTKVVRTALQDAASVSGLLITTEALIAELPKKAGPAAPAMPGGG 540

Query: 540 M 540
           M
Sbjct: 541 M 541