Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., Cpn60 chaperonin GroEL, large subunit of GroESL from Escherichia coli BL21

 Score =  895 bits (2312), Expect = 0.0
 Identities = 468/548 (85%), Positives = 506/548 (92%), Gaps = 4/548 (0%)

Query: 1   MAAKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI 60
           MAAKDV+FGNDARVKML GVN+LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
Sbjct: 1   MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI 60

Query: 61  ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI 120
           ELEDKF+NMGAQMVKEVAS+ANDAAGDGTTTATVLAQAI+ EGLKAVAAGMNPMDLKRGI
Sbjct: 61  ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI 120

Query: 121 DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG 180
           DKAV AAVEELKALSVPC+D+KAIAQVGTISANSD +VG +IAEAM+KVG++GVITVE+G
Sbjct: 121 DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG 180

Query: 181 QALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGV 240
             LQDELDVVEGMQFDRGYLSPYFIN  E+G+VEL++PFILL DKKISNIRE+LPVLE V
Sbjct: 181 TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV 240

Query: 241 AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVV 300
           AKA +PLLI+AEDVEGEALATLVVN MRGIVKVAAVKAPGFGDRRKAMLQDIA LTGG V
Sbjct: 241 AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV 300

Query: 301 ISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDY 360
           ISEEIG+ELEKATLEDLGQAKRV I K+ +TIIDG G++AAIQGRVAQIRQQIEEATSDY
Sbjct: 301 ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY 360

Query: 361 DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI 420
           D+EKLQERVAKLAGGVAVIKVGAATEVEMKEKK RVEDALHATRAAVEEGVVAGGGVALI
Sbjct: 361 DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI 420

Query: 421 RAASKLSSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGNYGYNA 480
           R ASKL+ L G NE+QNVGI+VALRAMEAPLRQIV N G+E SVVAN V+ G+GNYGYNA
Sbjct: 421 RVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA 480

Query: 481 ATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAPAMPDM----G 536
           AT  YG+MI+MGILDPTKVTRSALQ+AASVAGLMITTE M+T+LPK DA  +       G
Sbjct: 481 ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGG 540

Query: 537 MGGMGGMM 544
           MGGMGGMM
Sbjct: 541 MGGMGGMM 548