Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., GroEL chaperonin from Agrobacterium fabrum C58

 Score =  714 bits (1843), Expect = 0.0
 Identities = 366/544 (67%), Positives = 459/544 (84%), Gaps = 3/544 (0%)

Query: 1   MAAKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI 60
           MAAK+V+FG  AR KML+GV+ILADAVKVTLGPKGRNVV+DKSFGAP ITKDGVSVA+EI
Sbjct: 1   MAAKEVKFGRSAREKMLKGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI 60

Query: 61  ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI 120
           ELEDKF+NMGAQ+V+EVAS+ ND AGDGTTTATVLAQAIV EG KAVAAGMNPMDLKRGI
Sbjct: 61  ELEDKFENMGAQLVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI 120

Query: 121 DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG 180
           D AV   V++L+A +     ++ +AQVGTISAN +  +G  IAEAM++VG +GVITVEE 
Sbjct: 121 DLAVAEVVKDLQAKAKKINTSEEVAQVGTISANGERQIGLDIAEAMQRVGNEGVITVEEA 180

Query: 181 QALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGV 240
           +  + EL+VVEGMQFDRGYLSPYF+ N E    +L++ +ILL +KK+SN++ +LPVLE V
Sbjct: 181 KTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQAMLPVLEAV 240

Query: 241 AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVV 300
            +  +PL+I+AEDVEGEALATLVVN +RG +K+AAVKAPGFGDRRKAML+DIAILTGG V
Sbjct: 241 VQTGKPLVIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV 300

Query: 301 ISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDY 360
           ISE++G++LE  TL+ LG++K+VSI+KEN+TI+DGAG ++ I+GRVAQI+ QIEE TSDY
Sbjct: 301 ISEDLGIKLESVTLDMLGKSKKVSISKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDY 360

Query: 361 DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI 420
           D+EKLQER+AKLAGGVAVI+VG +TEVE+KEKKDR++DAL+ATRAAV+EG+V GGGVAL+
Sbjct: 361 DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALL 420

Query: 421 RAASKLSSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNV-RAGEGNYGYN 479
           R+++K+ ++ G N++Q  GI +  +A+++ +RQI +NAGDE S+V   +    E NYGYN
Sbjct: 421 RSSTKI-TVKGVNDDQEAGINIVRKALQSLVRQIAENAGDEASIVVGKILDKNEDNYGYN 479

Query: 480 AATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAPAMPDMGMGG 539
           A TG YGD+I +GI+DP KV R+ALQ AASVA L+ITTEAMI ELPKK++ AMP M  GG
Sbjct: 480 AQTGEYGDLIALGIVDPVKVVRTALQNAASVASLLITTEAMIAELPKKES-AMPQMPGGG 538

Query: 540 MGGM 543
           MGGM
Sbjct: 539 MGGM 542