Pairwise Alignments

Query, 324 a.a., elongation factor P--(R)-beta-lysine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 515 a.a., Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) from Variovorax sp. SCN45

 Score =  141 bits (355), Expect = 4e-38
 Identities = 102/325 (31%), Positives = 155/325 (47%), Gaps = 29/325 (8%)

Query: 18  RATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSALHLMTSPE 77
           R+  +  +REF    + LEVETP M H      +   FKT       A    + L  +PE
Sbjct: 192 RSKAVSALREFMVANDFLEVETP-MLHPIPGGANAKPFKTHH----NALDQEMFLRIAPE 246

Query: 78  FHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALLQLV 137
            ++KRL+  G   ++++ +++RNE     HNPEFTM+E+Y   +++  LMD  + L++ +
Sbjct: 247 LYLKRLIVGGFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTETLIRTI 306

Query: 138 ---------LRCGSA--------ERMTYQEAFL---NVLGVCPLEEEMRELKQVAATLGL 177
                    L  G          ER+T +EA L   +  GV    ++   L      +GL
Sbjct: 307 ADKAVGTQQLTYGGKPVDLTQPFERLTIREAILKYTDAEGVAQGVDDTAWLIAALRKIGL 366

Query: 178 SDIAEPEEDRD--TLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKINPADPRVADRF 235
           S+  +    R   +L  + F   +E K+ Q  P F+ + P   + LA+ N   P V +RF
Sbjct: 367 SEEKDKLSQRSLASLQVMYFEETVEEKLWQ--PTFIMEHPTEISPLARANDERPEVTERF 424

Query: 236 EVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDYHLIAALEAGLPECAG 295
           E+Y  G E  NGF EL++  +Q ARF A  A +          D+  + ALE G+P   G
Sbjct: 425 ELYITGREFGNGFSELNDAEDQAARFNAQVAAKDGGDDEAMYYDHDFVRALEYGMPPTGG 484

Query: 296 VALGIDRLIMLALGEDHIDKVTAFP 320
             +GIDRL+ML      I  V  FP
Sbjct: 485 CGIGIDRLMMLLTDSPSIRDVILFP 509