Pairwise Alignments

Query, 324 a.a., elongation factor P--(R)-beta-lysine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., Aspartate--tRNA ligase from Pseudomonas putida KT2440

 Score = 57.4 bits (137), Expect = 9e-13
 Identities = 71/253 (28%), Positives = 103/253 (40%), Gaps = 21/253 (8%)

Query: 14  QLKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAK-GSALHL 72
           +L+ R+ +   IR F  E   L+VETP ++ AT           +++ P     GS   L
Sbjct: 140 KLRLRSRITSSIRRFLDENGFLDVETPILTRATPEGAR------DYLVPSRTHAGSFFAL 193

Query: 73  MTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDA 132
             SP+   + L+ AG    YQ+ K FR+E+      PEFT ++      D   +M   ++
Sbjct: 194 PQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLDESEIMGLTES 253

Query: 133 LLQ------LVLRCGSAERMTYQEAFLNVLGVCPLEEEMRELKQVAATLGLSD---IAEP 183
           +++      L L  G    MT++EA        P      EL  VA  L   D    A P
Sbjct: 254 MIRKLFKEVLDLEFGEFPHMTFEEAMRRYGSDKPDLRIPLELVDVADQLKDVDFKVFAGP 313

Query: 184 EED---RDTLLQLLFSIGI-EPKIGQITPAFVYDFPASQAALAKINPADPRVADRFEVYF 239
             D   R T L+L     +   KI + T  FV  + A   A  K+N     V        
Sbjct: 314 ANDPKCRVTALRLPGGASMPRSKIDEYT-KFVGIYGAKGLAYIKVNERAKGVEGLQSPIV 372

Query: 240 KGIELANGFHELD 252
           K I  AN  + LD
Sbjct: 373 KNIPEANLNNILD 385



 Score = 42.7 bits (99), Expect = 2e-08
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)

Query: 225 NPADPRVADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDYHLIA 284
           NPA   ++  +++   G EL  G   +     Q A F+    +  E    E+   + L+ 
Sbjct: 466 NPATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAEEQ---EEKFGF-LLD 520

Query: 285 ALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320
           AL+ G P   G+A G+DRL+ML  G   I +V AFP
Sbjct: 521 ALKFGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFP 556