Pairwise Alignments

Query, 154 a.a., protein-export protein SecB from Vibrio cholerae E7946 ATCC 55056

Subject, 154 a.a., Protein-export protein SecB (maintains pre-export unfolded state) from Variovorax sp. SCN45

 Score =  115 bits (288), Expect = 3e-31
 Identities = 56/147 (38%), Positives = 87/147 (59%), Gaps = 3/147 (2%)

Query: 6   QAPQQQFAIQRIYLKDVSFEAPSSPVMFQKEWNPDVKLDLDTQSRELGQGVYEVVLRLTV 65
           QA    F IQR+YLKD+S E P+SP +  ++  P V + L   ++ + +G++E+ +  TV
Sbjct: 5   QAQDPVFQIQRVYLKDLSLEQPNSPAILLEQEQPTVDIQLGVDAQPVAEGIFEITVSATV 64

Query: 66  TVKNAEETAFLCEVQQAGIFSAEQMEAGQLAHCLGAFCPNILFPYARETISSLVVKGTFP 125
             K  ++T FL E +QAGIF    +   Q+   LG  CP I++PY R  ++ ++ +G FP
Sbjct: 65  QTKIQDKTVFLVEAKQAGIFEIRHLPEEQMGAILGIACPQIVYPYLRGNVADVIQRGGFP 124

Query: 126 QLNLAPVNFDALFMNYLQQQAQEGATA 152
            ++LA +NF A+   Y QQQAQ    A
Sbjct: 125 PVHLAEINFQAM---YEQQQAQAAGQA 148