Pairwise Alignments

Query, 378 a.a., acetylornithine deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Variovorax sp. SCN45

 Score = 65.5 bits (158), Expect = 2e-15
 Identities = 98/400 (24%), Positives = 163/400 (40%), Gaps = 49/400 (12%)

Query: 7   LEVYEGLISTSSISSTDARWDEGNEQVIAKLADWLSALGFSIQIEQVAP---NKQNLIAK 63
           L++ E LIS  S++  DA    G +Q+   L + L+ LGF+++  +  P      NL A 
Sbjct: 5   LQLAEQLISRPSVTPDDA----GCQQI---LGERLALLGFTLETIESGPADFRVTNLWAV 57

Query: 64  LGSGEGG-----LLLAGHSDTVPFDE-GRWNYNPHALTQVNNRFYGLGTADMK----GFF 113
               +       L+ AGH+D VP     +W  +P   T  + + YG G  DMK     F 
Sbjct: 58  RRPADAAATTRTLVFAGHTDVVPTGPVEQWTSHPFTPTHRDGKLYGRGACDMKTSVAAFV 117

Query: 114 AFIYEAVKNVDWSKQTKPLYVLATCDEETTMLGARHFTENAPFKP----DYCIIGEPTSL 169
             I + ++ V   + T  L +L T DEE   +       N         DYCI+GEPT++
Sbjct: 118 TSIEDFLQAVPEPRLT--LALLLTSDEEGPGVDGTVVVCNTLAARGEVIDYCIVGEPTAV 175

Query: 170 -----VPIRAHKGHVANAIRVTGKSGHSSNPALGVNAIEIMHEVLFALMQLR-----DRL 219
                +     +G ++  + V G  GH + P L  N +  +   L  L+ +      D  
Sbjct: 176 ERCGDMIKNGRRGTMSGKLTVKGVQGHIAYPHLAKNPVHSVAPALAELVAINAAGGWDAA 235

Query: 220 IKEYHHPGFEIPTPTLNLGHIHGG-DSPNRICGCCELHYDVRPLPGISLDGLDNLMHDAL 278
              Y  P       +  + + H G  + N I G   + ++ R     + + L   +H  L
Sbjct: 236 SNPYFQP------TSWQISNFHSGTGASNVIPGSAVIDFNFRFSTESTPESLQQRVHAVL 289

Query: 279 --REVQQKWPGRIELVPLHDPIPGYECAHDHPFIHGISEICEQEAQTVNYCTEAPFLQQV 336
              +V       I  +P     PG         I   + I E E  T    ++A F+ ++
Sbjct: 290 DAHQVDYTLAWTIGGLPFL-TTPGELVTAVQGAIRDETGI-ETELSTSGGTSDARFIAKI 347

Query: 337 CPTLV-LGPGSIDQAHQPDEFLAFEFIDPTVRVLSRAMQK 375
           C  +V LGP +    H+ DE +    I+    +  R +++
Sbjct: 348 CRQVVELGPVNA-SIHKIDEHIDVAEIETLKNIYVRTLKQ 386