Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., HTH-type transcriptional regulator CynR from Xanthobacter sp. DMC5

 Score = 99.4 bits (246), Expect = 9e-26
 Identities = 81/286 (28%), Positives = 136/286 (47%), Gaps = 6/286 (2%)

Query: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60
           M +R  EYLVA+A   HF +AAEAC VSQP LS  IRKLE+E+G  L+ RS R +  T  
Sbjct: 1   MFMRQLEYLVAVAREGHFGRAAEACRVSQPGLSAGIRKLEEELGLPLVIRSHRFLGLTLE 60

Query: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPEL 120
           G +++  A++++++    +   +  +  ++G L IG IP   P  LP ++     R+P +
Sbjct: 61  GERVLAWAQRMVADYNGMRQDLSDASSGLSGTLRIGAIPAAIP-ALPALVNGFCARYPNV 119

Query: 121 ELYLHEAQTNQLVRQLEEGKLDC-LVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARD 179
            + L    +  + R L+   +D  +     E  A  + I LY+E   + V    A++ R+
Sbjct: 120 RVQLLSLASTAIQRGLDTLDIDAGVTYFENEPLARVRSIALYDETY-VFVTAAGAFSGRN 178

Query: 180 EVDMLELKGKTVLALGDGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAGAGITL 239
            +   E     +  L      R         AG   + R +A +   + ++V +GA   +
Sbjct: 179 AIGWSEAAAHPLCLLTSDMQNRRIVDRILAEAGVASNPRIEANTFLGVWSLVRSGAWSGI 238

Query: 240 LPELALPEDKTKDGVCYLRAVNPIPSRRLVLAYR---PGSPLRQRF 282
           +P   L   +  D +  L  V+P+ S+ + +      P SPL   F
Sbjct: 239 VPHTYLETFEAPDHLVALPLVDPVHSQSVGVVTSDRDPQSPLAGAF 284