Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  107 bits (267), Expect = 3e-28
 Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 11/293 (3%)

Query: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60
           M +R   Y +A+A+  HF +AA+   +SQP LS QI+ LE E+G  L ER++RRV  +EA
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEQEVGARLFERTNRRVELSEA 60

Query: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPY--LLPKIIPTLKERFP 118
           G   + +A+ +L++V    D+A +      G L IGF  +  P+   +P+ I   ++ FP
Sbjct: 61  GRLFLHEARLVLAQVDKAADVARRAQLGELGELKIGFTSS-APFNSSIPQAIFAFRQAFP 119

Query: 119 ELELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAAR 178
            + L L E  + ++   L +  +   ++  +        +EL  E L   +   H   A 
Sbjct: 120 AVHLNLQEMSSTEVAESLVDESIQVGLMRPLPLPDSLSVVELMREPLVAVMNAGHPLVAG 179

Query: 179 DE----VDMLELKGKTVLALGDGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAG 234
            E    +  L  +         G  L  Q L  C  AG       +A    T+  +VAAG
Sbjct: 180 SERGLHLAQLAEEPFVFFPRSYGSGLYAQLLSLCRDAGFSPHFAQEAGEAMTIIGLVAAG 239

Query: 235 AGITLLPELALPEDKTKDGVCYLRAVNPIPSRRLVLAYRPG--SPLRQRFEQL 285
            G+++LP  A  +    DGV Y   ++P     + L  R G  +P+   F +L
Sbjct: 240 LGVSVLP--ASYQRIRIDGVVYRTLLDPEAVTSVWLVQRKGAQTPMAAAFVEL 290