Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  103 bits (257), Expect = 5e-27
 Identities = 77/251 (30%), Positives = 123/251 (49%), Gaps = 15/251 (5%)

Query: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60
           M +R   Y +A+A+  HF +AA+   +SQP LS QI+ LE E+G  L +R++RRV  +EA
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEA 60

Query: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYL--LPKIIPTLKERFP 118
           G   +++A+++L++V+   D+A +      G + IGF  +  P+   +PK I   ++RFP
Sbjct: 61  GRLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSS-APFTSKIPKAIHAFRQRFP 119

Query: 119 ELELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKE----IELYNEVLSIAVPCDHA 174
            + L L E  +    R + EG  D  +   +    P  E     EL+ E L   +   H 
Sbjct: 120 AVHLNLKEMSS----RDVAEGVFDESIEVGLMRPMPLPEGLVATELFREPLVAVINASHP 175

Query: 175 WAARDE--VDMLELKGKTVLAL--GDGHCLRDQALGFCFAAGAKDDERFKATSLETLRNM 230
            A   E  V M  L  +  +      G  L  Q L     AG       +A    T+  +
Sbjct: 176 LAEGTEQGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGL 235

Query: 231 VAAGAGITLLP 241
           V+AG G+++LP
Sbjct: 236 VSAGLGVSVLP 246