Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  119 bits (297), Expect = 1e-31
 Identities = 83/294 (28%), Positives = 144/294 (48%), Gaps = 15/294 (5%)

Query: 3   IRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEAGL 62
           ++D    V +A+   F +AAEA  +SQP LS +I+KLE+ +GT+LLER++RRV  T  G 
Sbjct: 5   LQDIRSFVKIAELGSFHEAAEALHLSQPALSRRIKKLEEGLGTSLLERTTRRVSLTSVGR 64

Query: 63  QLVDQAKKILSE----VKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFP 118
             + +A+++L +    + + +++A +QTG +T    +  IPT   Y LP +I    E++P
Sbjct: 65  DFLPKARRLLDDFEDSILSIRELAERQTGQVT----LACIPTAAFYFLPSVIRDYNEQYP 120

Query: 119 ELELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAAR 178
           ++ + L +   N  +  +  G+ D  +     +    + + L  E   +A   DH  A R
Sbjct: 121 KIRIRLLDLSANDGLEAVLRGEADFGINMMSGQHPDIEFVSLVQEHFVLACRRDHPLANR 180

Query: 179 DEVDMLELKGKTVLALG---DGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAGA 235
             V   EL    ++ +G       L D AL        +    ++   L T   MV AG 
Sbjct: 181 ASVTWTELADYRLIGVGRLSGNRMLLDHALS---GLNLRPKWFYEVQHLSTSLGMVEAGL 237

Query: 236 GITLLPELALPEDKTKDGVCYLRAVNPIPSRRLVLAYRPGSPLRQRFEQLAEVI 289
           G++ +P LA+P +     +  +  + P  +R L L YR G+ L    E+   ++
Sbjct: 238 GVSAMPSLAMP-NADHPTLVSVPLIEPQVTRTLGLVYRRGASLSPAAEKFVSIL 290