Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator from Paraburkholderia sabiae LMG 24235

 Score =  108 bits (270), Expect = 1e-28
 Identities = 86/278 (30%), Positives = 135/278 (48%), Gaps = 8/278 (2%)

Query: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60
           M +R   Y +A+AD ++  +AAE   + QP LS QI  LEDE+G  L  R+   V+ TEA
Sbjct: 1   MELRHIRYFLAVADERNVTRAAERLGIGQPPLSQQIHALEDELGVRLFRRTGHGVVLTEA 60

Query: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLG-PYLLPKIIPTLKERFPE 119
           G      AK+IL + +   + A        G  +IGF  +     ++ K+I   ++ +P 
Sbjct: 61  GEAFAADAKRILHDTRLAVEKAQSAGRGEIGQFNIGFTGSAAFNPVVSKLIRAYRQAYPN 120

Query: 120 LELYLHEAQTNQLVRQLEEGKLD-CLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAAR 178
           + L L E  T QL+  L++G++D   V    +  A  +   +  E + I +P  H  A +
Sbjct: 121 VTLTLAEGNTAQLLAYLDDGRVDVAFVRLGSQSPAGVQFHHIAIEPMKIVLPATHRLAKK 180

Query: 179 DEVDMLELKGK--TVLALGDGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAGAG 236
            ++ + EL      +L       L D  +G C  AG +     +A  L ++ N+VAA  G
Sbjct: 181 RKIALSELAEDPFVMLPREASPTLHDVIVGACREAGFEPIAGQQAPQLSSVVNLVAAEFG 240

Query: 237 ITLLPELALPEDKTKDGVCYLRAV-NPIPSRRLVLAYR 273
           ++L+P  A       +GV Y   + NPI S RL LA R
Sbjct: 241 VSLVP--ASVCQIRVEGVVYTDVLGNPI-SIRLALASR 275