Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., DNA-binding transcriptional dual regulator (NCBI) from Escherichia coli BW25113

 Score =  388 bits (997), Expect = e-113
 Identities = 188/293 (64%), Positives = 237/293 (80%)

Query: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60
           MNIRD EYLVALA+H+HFR+AA++C VSQPTLSGQIRKLEDE+G  LLER+SR+VLFT+A
Sbjct: 1   MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60

Query: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPEL 120
           G+ LVDQA+ +L EVK  K+MA+QQ   M+GPLHIG IPT+GPYLLP IIP L + FP+L
Sbjct: 61  GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL 120

Query: 121 ELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDE 180
           E+YLHEAQT+QL+ QL+ GKLDC++LA V+E+  F E+ L++E + +A+  DH WA R+ 
Sbjct: 121 EMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANREC 180

Query: 181 VDMLELKGKTVLALGDGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAGAGITLL 240
           V M +L G+ +L L DGHCLRDQA+GFCF AGA +D  F+ATSLETLRNMVAAG+GITLL
Sbjct: 181 VPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL 240

Query: 241 PELALPEDKTKDGVCYLRAVNPIPSRRLVLAYRPGSPLRQRFEQLAEVIKHRL 293
           P LA+P ++ +DGV YL  + P P R + L YRPGSPLR R+EQLAE I+ R+
Sbjct: 241 PALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARM 293