Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., LysR family transcriptional regulator from Dickeya dadantii 3937

 Score =  105 bits (261), Expect = 2e-27
 Identities = 82/296 (27%), Positives = 136/296 (45%), Gaps = 15/296 (5%)

Query: 3   IRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEAGL 62
           ++  +  V +AD   F KA+E   +SQP L+ +I+KLE+ +GTTL ERS+RRV  T  G 
Sbjct: 5   LQGIKAFVKIADTGCFTKASELLHISQPALTRRIKKLEESLGTTLFERSTRRVSLTAVGK 64

Query: 63  QLVDQAKKIL----SEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFP 118
             +  A+ ++    + +   ++MA+ QTG +T    +  IPT   Y LP +I    E +P
Sbjct: 65  SFLPNARNLIDFYENSILNIQEMASHQTGFVT----LSCIPTAAFYFLPAVIRNYNEHYP 120

Query: 119 ELELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAAR 178
            + + + E   +  +  +  G  D  +          +   L NE   +A   DH  A +
Sbjct: 121 NIRIRILEHSASDCLDAVLNGDADFGINMINVTHFNVEFTPLVNEPFVLACRRDHPLAKK 180

Query: 179 DEVDMLELKGKTVLAL---GDGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAGA 235
             V   EL    ++ +        L +QAL     +  K +  ++   L T   MV AG 
Sbjct: 181 SLVMWEELADYPLIGVRRSSGNRLLIEQALE---NSAWKPNWFYEVRHLSTSLGMVEAGL 237

Query: 236 GITLLPELALPEDKTKDGVCYLRAVNPIPSRRLVLAYRPGSPLRQRFEQLAEVIKH 291
           GI  +P LA+P D+    +     + P+  R L +  R  S L    E+  +++ H
Sbjct: 238 GIAAVPSLAMPRDE-HHVLVSKPLIEPVVRRTLGVVQRKDSTLTPAAERFKDILMH 292