Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., Morphology and auto-aggregation control protein from Alteromonas macleodii MIT1002

 Score =  158 bits (400), Expect = 1e-43
 Identities = 96/294 (32%), Positives = 148/294 (50%), Gaps = 1/294 (0%)

Query: 2   NIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEAG 61
           +I    Y VA+A +  FR+AA    +SQPTL+ Q+  LE+ +G TL ERS    L +  G
Sbjct: 9   SINQIRYFVAVAKYLSFRQAAGILGISQPTLTSQVSALENLLGLTLFERSRTGTLLSPQG 68

Query: 62  LQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPELE 121
             L+D A+++L   + F ++A   +        +G  PTLGPYLLP ++P L +R P L 
Sbjct: 69  KALLDAAEEVLQASQRFSEIARDLSEGEVVTYRLGIPPTLGPYLLPFVLPDLHKRKPGLR 128

Query: 122 LYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDEV 181
            Y+ E   N L   L  G+ D ++     E +      L+ E L    P DH  + +  V
Sbjct: 129 FYVREGAPNALQHGLLRGEYDLILSPLSGENSQLITQPLFKEPLKFVTPSDHKLSGKAYV 188

Query: 182 DMLELKGKTVLALGDGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAGAGITLLP 241
              E+ G+ VL L D H    Q    C   GA     ++ TSL+TLR MV  G G+  LP
Sbjct: 189 KPEEISGEKVLTLEDRHHFHHQVQRICDEIGADLQRDYEGTSLDTLRQMVVMGMGVAFLP 248

Query: 242 ELALPEDKTKDGVCYLRAVNPIP-SRRLVLAYRPGSPLRQRFEQLAEVIKHRLQ 294
            L +  +  K    ++  +  +P  R+  LA+R  +P R+ F +++ +IK  ++
Sbjct: 249 GLYIHSELHKPEALHVCEIADMPIERQHSLAWRNTAPGRKTFREISIIIKEIIE 302