Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  193 bits (491), Expect = 4e-54
 Identities = 106/290 (36%), Positives = 162/290 (55%), Gaps = 2/290 (0%)

Query: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60
           ++++   Y  ALA   HF +AAEAC +SQP LS QIR+LE+ IG  L+ER SR++  T  
Sbjct: 4   LSMKHLRYFDALAKIGHFGRAAEACAISQPALSLQIRELEELIGAPLVERGSRQIRLTAL 63

Query: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPEL 120
           G +  ++ + IL  V   +D+A    G ++G L IG IPT+ PYLLP++I TL   +P L
Sbjct: 64  GDEFAERTRAILRSVDELQDLARAGHGPLSGRLRIGVIPTVAPYLLPQVIKTLTRHYPGL 123

Query: 121 ELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDE 180
           E    EA T +L+  L E +LD  ++A        +E+ L++E   +  P + A      
Sbjct: 124 EARPREAVTQKLIEDLLEARLDMAIVALPVSEPALEEVPLFSEEFILVRPMEDAGMPVPS 183

Query: 181 VDMLELKGKTVLALGDGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAGAGITLL 240
            D  +L    +L L +GHC R+QAL FC    A      + +SL TL  MV AG G+TL+
Sbjct: 184 AD--KLGEMRLLLLEEGHCFRNQALSFCSTTNAPPRVLMEGSSLSTLVQMVGAGIGVTLI 241

Query: 241 PELALPEDKTKDGVCYLRAVNPIPSRRLVLAYRPGSPLRQRFEQLAEVIK 290
           P++A+  +     V   R   P PSR + + +R  +PL  +F  ++E+++
Sbjct: 242 PQMAVDMETRLSTVSVFRLAEPRPSRTIGIVWRKSNPLSAQFAHISEIVR 291