Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 757 a.a., Biosynthetic peptidoglycan transglycosylase from Xanthobacter sp. DMC5

 Score =  171 bits (434), Expect = 1e-46
 Identities = 87/196 (44%), Positives = 127/196 (64%)

Query: 65  GKLIAQFGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSA 124
           G  I + G K+   + LE++P  LI+A +ATED R+YEH+G D  G  RA      +G  
Sbjct: 124 GNSIGERGVKQNDTIPLEDIPDNLIKATLATEDRRFYEHWGIDVAGTARALVTNARAGGV 183

Query: 125 SQGASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSY 184
            QG S+++QQLA+N FLSNE+ + RK+KE F+AI +E  L+K +IL+LYL++ YLG  +Y
Sbjct: 184 RQGGSSLSQQLAKNLFLSNERTIERKIKEAFLAIWLEARLTKSQILKLYLDRAYLGGGAY 243

Query: 185 GVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKY 244
           GV AAA+ YFGK VK++ L E A++AGL KAPS   P  ++  A  R + VL  +++  +
Sbjct: 244 GVDAAARYYFGKSVKEVNLAEAAMLAGLFKAPSKYAPHINLPAARARASTVLDNLVEAGF 303

Query: 245 ITKAEYDAARAEPVLP 260
           +T+ +   AR  P  P
Sbjct: 304 MTEGQVFGARRNPATP 319



 Score =  132 bits (331), Expect = 1e-34
 Identities = 101/331 (30%), Positives = 150/331 (45%), Gaps = 55/331 (16%)

Query: 444 AFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLATLIN 503
           + V M P NG + ALVGG ++  ++FNRAT ++RQ GSS KP++Y+ AL  G   +T++ 
Sbjct: 390 SIVVMEP-NGTLRALVGGRDYGESQFNRATDALRQPGSSFKPYVYTVALMNGYRPSTIVQ 448

Query: 504 DAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYLTR 563
           DAPI   +      W P+N   +Y G   L+  L  S N +AVR+    G  +  +   +
Sbjct: 449 DAPICLGN------WCPQNYGRSYMGSITLKTALQHSLNTVAVRLAERFGRKKIVDLAHQ 502

Query: 564 FGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSAE 623
            G +   LP S  + LGA  +T       +SVFAN G  V P  +  VE   GN      
Sbjct: 503 MGIR-TPLPISAPLPLGAAEVTLFDATTAYSVFANGGKSVYPHAV--VEMRIGN------ 553

Query: 624 PKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGWNG 683
                        D     D  +P   ++I +Q  +   +ML           ++   NG
Sbjct: 554 ------------GDVIWRFDRDAPKPVQIIPQQALYDINDML-----------NNVVENG 590

Query: 684 TGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNRNIE 743
           TG RA+ L    + GKTGTTN  +DAW+ G+    V   W G DD++             
Sbjct: 591 TGRRAR-LPNAKVAGKTGTTNAYRDAWFMGFTGNYVCGVWFGNDDYA------------- 636

Query: 744 DDVSGAESGGKTALPAWVEFMSLALQDVPVQ 774
             V    +GG      W + M+ A Q + ++
Sbjct: 637 --VMNKMTGGTLPAMTWQKVMAYAHQGIEIK 665