Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

 Score =  163 bits (412), Expect = 4e-44
 Identities = 90/261 (34%), Positives = 153/261 (58%), Gaps = 7/261 (2%)

Query: 76  RIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTITQQL 135
           RI +KL+++P  L+E ++A ED  +Y H+G  P  I RA +   + G  +QG ST+TQQL
Sbjct: 168 RILIKLDQVPPYLLETLVAVEDRDFYHHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQL 227

Query: 136 ARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRS----YGVGAAAQ 191
            +NF+L+NE+ + RK+ E  +A+ +E   SKQEILE YLN++++G       +G G A+Q
Sbjct: 228 VKNFYLTNERSLTRKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQ 287

Query: 192 AYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYD 251
            +FG+ + +L L ++AL+ G+ K PS  NP  + ERA  RRN+VL  +  +   T  +  
Sbjct: 288 FFFGQPLSELKLHQVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVA 347

Query: 252 AARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAAN 311
           AA+  P+     G   + + P   ++ +  + E Y +E     G+ ++T+ D  LQ  A 
Sbjct: 348 AAKKMPLGVTTRGKLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKA- 406

Query: 312 QAAINNLLAYDERHGYRGAEK 332
           +A++N+   +    G +G+++
Sbjct: 407 EASVND--TFKRLTGRKGSDE 425



 Score =  117 bits (294), Expect = 2e-30
 Identities = 104/353 (29%), Positives = 152/353 (43%), Gaps = 58/353 (16%)

Query: 444 AFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNK--GLTLATL 501
           A V  NPE G V A++G        FNRA  +VR +GS +KP +Y  AL K    TL + 
Sbjct: 429 AMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKPAVYLTALEKPSKYTLTSW 488

Query: 502 INDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYL 561
           ++D P++      G  W P+N      G   L  G+A S N+   R+  EVG+    + +
Sbjct: 489 LSDDPLSV-KGGDGQVWTPQNFDRRSHGTVFLYQGIAHSYNISTSRLGLEVGVPNVLKTI 547

Query: 562 TRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFS 621
            R G    + P   +I LGAG++TP+++A  +   AN G+      I  V      +   
Sbjct: 548 ARLGV-TREFPAFPSILLGAGAMTPMEVATMYQTLANGGFNTPMRGIRSV------LTAE 600

Query: 622 AEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGW 681
            EP           L  +  Q      A  +   QNA + R M                 
Sbjct: 601 GEP-----------LKRYPFQIQQRFDAGSIYLIQNA-MQRVMR---------------- 632

Query: 682 NGTGWRAQAL--KRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPN 739
            GTG    ++      + GKTGT+NDS+D+W+ G+   ++ V W+G DD+    GKT   
Sbjct: 633 EGTGRSVYSVLPANLTLAGKTGTSNDSRDSWFAGFGQDVLAVVWLGRDDN----GKT--- 685

Query: 740 RNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQQKAVPNNIARVRIDRDTG 792
                      +G   AL  W  FM  A   +P+     P+NI +  ID  TG
Sbjct: 686 ---------PFTGATGALQVWTSFMRKA-DPLPLNMPQ-PDNIVQAWIDPHTG 727