Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 697 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Sphingobium sp. HT1-2

 Score =  178 bits (452), Expect = 8e-49
 Identities = 114/315 (36%), Positives = 168/315 (53%), Gaps = 18/315 (5%)

Query: 12  KFIKRLLVFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQF 71
           K++ R L   L+    G+  I    F     LPD  +L+       ++V + DG +I   
Sbjct: 16  KWLVRGLKIGLVGAFAGLVAIGVAVFIAMQSLPDYNSLKSSPNGQMIRVHAADGSVIVSL 75

Query: 72  GEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVL---ASGSASQGA 128
           G      L  +++P  +++A+++TED R+Y H G DP+G+ RAA+  L    SG   QGA
Sbjct: 76  GPSFGRWLSYDQIPSVMVDAMVSTEDRRFYMHPGVDPVGMARAAWVALERRGSGRRWQGA 135

Query: 129 STITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGA 188
           STITQQ+ARN FL+N     RKV+E+ +A+ +E+  SKQ+ILELYLNK+Y G  +YG+ A
Sbjct: 136 STITQQVARNIFLNNSYSWGRKVREMVLAMALERKFSKQQILELYLNKVYFGGGAYGIDA 195

Query: 189 AAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKA 248
           A++ +FG   + L L E A+IAGL KAPS+ +P    E A  R  VVL  M +   I+ A
Sbjct: 196 ASRKFFGHPAQSLDLPEAAIIAGLVKAPSSYSPTADAEAAIGRAGVVLDLMQENGKISAA 255

Query: 249 EY-----DAARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVD 303
           ++     D  R  P  P       + +  Y  + A   +     E       + VYTT+D
Sbjct: 256 DHANANLDGVRMAPEPP-------QNSVRYFTDWALPQLDTLIDEP---NEPLEVYTTID 305

Query: 304 SKLQRAANQAAINNL 318
             +Q AA  A   N+
Sbjct: 306 LGMQNAATAAVKANV 320



 Score =  126 bits (317), Expect = 4e-33
 Identities = 100/349 (28%), Positives = 152/349 (43%), Gaps = 61/349 (17%)

Query: 429 AITAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIY 488
           A TA     V N     +     +GAV A+VGG ++V + +NRAT +VRQ GS+ K F+Y
Sbjct: 311 AATAAVKANVSNGMQGALVSLDRDGAVRAMVGGLDYVTSNYNRATTAVRQPGSAWKIFVY 370

Query: 489 SAALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRV 548
            AAL  G T  T + D P+          W P+NS   + G   +R   A S N +A ++
Sbjct: 371 MAALEAGYTPDTGVTDEPVTI------NGWSPRNSNGRFAGAIDIRTAFAYSINTVAAKL 424

Query: 549 LREVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYI 608
             EVG     +   RFG     +    ++ LG   +  + M + F+  A  G  V P+ I
Sbjct: 425 GVEVGFPTVADMARRFGI-TTPINTHPSMVLGTSDVRLIDMTRAFASIARKGVAVTPYGI 483

Query: 609 SRVENPFGNIEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVISE--QNAFLTREMLY 666
           ++V    G + +        H++ +S +         +P+    +++  Q A  T     
Sbjct: 484 TKVTTADGRMLYQ-------HQDDTSRV-------LVAPWVAAGMTDLMQTAVST----- 524

Query: 667 SNIWGGGEWSSDTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGF 726
                           GTG  AQ    R + GKTGTTN  KD W+ G++ GI    WVG 
Sbjct: 525 ----------------GTGRAAQI--GRPVAGKTGTTNSGKDGWFLGFSSGITTGVWVGR 566

Query: 727 DDHSRNLGKTAPNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQQ 775
           DD      K  P+            GG+    A+ ++M +A+   PV+Q
Sbjct: 567 DD-----AKAVPSL----------YGGRAPAHAFADYMKVAVAKRPVEQ 600