Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 691 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Sphingobium sp. HT1-2

 Score =  159 bits (402), Expect = 5e-43
 Identities = 101/305 (33%), Positives = 170/305 (55%), Gaps = 9/305 (2%)

Query: 10  PVKFIKRLLVFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIA 69
           P  + +RL +F  I +  G+  +     ++    P   +L+ +   + + + S DG L+A
Sbjct: 38  PTPWKRRLQIFGWI-VAAGLALLMLIIAWLAVTAPMSRSLQPIAPPS-ISLMSADGHLVA 95

Query: 70  QFGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGAS 129
           + G     P+++ ++P  + +A +A ED R+Y+H+G DP GI RA +  + S  +SQG S
Sbjct: 96  RRGAIIDKPVEVAKLPAHVPQAFMAIEDRRFYDHWGVDPRGIARAMWHNIWSDGSSQGGS 155

Query: 130 TITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAA 189
           TITQQLA+  FLS+++ + RK +E  IA  +E  L+K +ILE YL+ +Y G   YG+ AA
Sbjct: 156 TITQQLAKGVFLSSDRTMGRKAREALIAFWLEAWLTKDQILERYLSNVYFGDNVYGLRAA 215

Query: 190 AQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAE 249
           +  YF ++ + LT+ + A++AGL KAPS + P  +++ A  R  +V Q M++  YI+KA+
Sbjct: 216 SLHYFDRQPERLTISQAAMLAGLLKAPSRLAPTSNLKGARARAALVTQAMVEAGYISKAQ 275

Query: 250 YDAARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSG-MNVYTTVDSKLQR 308
            D  +  P       +    +  Y A+    W++    + A    G   V TT+D ++QR
Sbjct: 276 RD--QLAPARLDVRESPDATSGTYFAD----WVLPEARDRAGAVYGAQEVKTTLDWRIQR 329

Query: 309 AANQA 313
            A  A
Sbjct: 330 LAEAA 334



 Score =  123 bits (309), Expect = 3e-32
 Identities = 111/386 (28%), Positives = 168/386 (43%), Gaps = 68/386 (17%)

Query: 424 RTQDGAITAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSI 483
           R Q  A  A +   +  A  A VAM P+ G+V A++GG N+  + FNRA Q+ RQ GS+ 
Sbjct: 326 RIQRLAEAAIRRAPLGGAQVALVAMKPD-GSVVAMIGGKNYEKSSFNRAVQAKRQPGSTF 384

Query: 484 KPFIYSAALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNV 543
           K F+Y AA   G+T   +I D PI     + GT +RP N    Y G   LR   A S NV
Sbjct: 385 KLFVYLAAFRAGMTPDDMIEDTPI-----TTGT-YRPANHGGKYRGRITLRQAFAASSNV 438

Query: 544 MAVRVLREVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFV 603
            AVR+ ++VG+D   +     G     L    ++ALG   +  V++A+ ++  A   Y V
Sbjct: 439 AAVRLTQKVGVDNVIKVARDLGVTA-PLTEDLSLALGTSEIPLVELAEAYASVAAGAYPV 497

Query: 604 EPFYISRVENPFGNIEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTRE 663
               +   E  +                     D   ++        +  S+    + R+
Sbjct: 498 LAHGLPPEEQGW--------------------FDRLMKRQ-------RHFSDDQLEMIRD 530

Query: 664 MLYSNIWGGGEWSSDTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAW 723
           +L           S     GTG  + A  R    GKTGTT DS+DA + GYA G+V   W
Sbjct: 531 LL-----------SSAANRGTG--SAAALRTSTFGKTGTTQDSRDAIFVGYAGGLVTAVW 577

Query: 724 VGFDDHSRNLGKTAPNRNIEDDVSGAESGGKTALPAWVEFMSLALQD----VPVQQK--A 777
           +G DD++               + G  +GG      W  FM+ A+ +    VP +++   
Sbjct: 578 IGNDDNA--------------PLPGGAAGGGVPARIWRNFMAGAINEPVEKVPEEEQDPD 623

Query: 778 VPNNIARVRIDRDTGLLTNKLDSSSM 803
           + N IA V ++   G +   +D   M
Sbjct: 624 LVNAIANVSVETGIGNVGVGMDQGGM 649