Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 662 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  221 bits (563), Expect = 1e-61
 Identities = 118/271 (43%), Positives = 175/271 (64%), Gaps = 1/271 (0%)

Query: 43  LPDVATLRDVQLQTPMQVFSQDGKLIAQFGEKRRIPLKLEEMPKELIEAVIATEDSRYYE 102
           LP+V  L D     P+++ ++DG L+A++GE+RR  + +E +P+ +  A++A ED+R++E
Sbjct: 39  LPEVGHLADYDPMLPLRIHARDGSLLAEYGEERRQFVPIERIPQTMQNALLAIEDARFHE 98

Query: 103 HYGFDPIGITRAAFAVLASGSASQGASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQ 162
           H   D  GI RAA   L +G  +QGASTIT Q+AR FFLS EK   RK+ EI +A  +E 
Sbjct: 99  HGAVDYAGIARAALGNLVAGGHTQGASTITMQVARVFFLSREKTYRRKIMEILLAYKLEA 158

Query: 163 LLSKQEILELYLNKIYLGYRSYGVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPI 222
             SK +ILELY+N+IYLG R+YG  AAA  YF K +  L++ E A++AGLPKAPS  NP+
Sbjct: 159 AYSKGKILELYMNQIYLGERAYGFAAAASVYFDKTLDQLSVAEAAMLAGLPKAPSAYNPV 218

Query: 223 YSVERATNRRNVVLQRMLDEKYITKAEYDAARAEPVLPKYHGAEIELNAPYVAEIARAWM 282
            + ERAT R+  +L+RM +  ++ +  +  ARAEP+  +      +    +  E  R  M
Sbjct: 219 VNRERATVRQQHILKRMRELGHLDEPAHQQARAEPLTLRPRPPPADPATAHAVEQVRKMM 278

Query: 283 VERYGEEAAYTSGMNVYTTVDSKLQRAANQA 313
           V R+G+E AY+ G++V TT+D   Q+AA +A
Sbjct: 279 VARFGDE-AYSRGLDVTTTLDVAAQQAAARA 308



 Score =  201 bits (511), Expect = 1e-55
 Identities = 125/351 (35%), Positives = 185/351 (52%), Gaps = 48/351 (13%)

Query: 439 PNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTL 498
           P    A V+++ ++G + ALVGG +F  N+F+ A Q+VRQ GS+ KPF++SAAL KG   
Sbjct: 319 PQLEGALVSVDAKSGDILALVGGSDFARNQFDHAVQAVRQPGSTFKPFVFSAALEKGYFP 378

Query: 499 ATLINDAPINQWDESQGT-AWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDET 557
            T I+D        ++G  AWRP+N    Y G    R  LA+SKNV+AV ++   G +  
Sbjct: 379 GTRIDDTQRLVTPAARGRKAWRPRNYGHQYEGFITARRALARSKNVVAVNLMDAAGPEYV 438

Query: 558 REYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGN 617
           +++ TRFGF  +  P    +ALGAG++TP+Q+ + ++VFAN G  VE   + +V    G 
Sbjct: 439 QQFATRFGFAAELNPPILPLALGAGAVTPLQLTEAYAVFANEGERVESRLVLQVSERGGG 498

Query: 618 IEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSS 677
           + +                    E    +P A +VIS +NA +   +L            
Sbjct: 499 VLY--------------------EAPTVAPRA-QVISPRNAHVMDSLL-----------R 526

Query: 678 DTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTA 737
           D    GT  RAQAL R D  GKTGT+ND++D W+ GY+ GI  V W+GF D +R+LG   
Sbjct: 527 DVVRQGTARRAQALGRADTAGKTGTSNDARDVWFAGYSSGIASVVWMGF-DQARSLGNA- 584

Query: 738 PNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQQKAVPNNIARVRID 788
                        +GG  ALP W ++M  A+ D P  Q++ P ++  +  D
Sbjct: 585 -------------TGGSLALPVWTDYMKTAVADRPQAQRSPPADLVMLGDD 622