Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 852 a.a., penicillin-binding protein 1A from Magnetospirillum magneticum AMB-1

 Score =  422 bits (1086), Expect = e-122
 Identities = 271/812 (33%), Positives = 422/812 (51%), Gaps = 51/812 (6%)

Query: 12  KFIKRLLVFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQF 71
           +F   L    ++  I+G   +   +++    LPD   L   +     +V+  DG+L+A++
Sbjct: 3   RFFLGLFSLLILLAIVGAGGVLFVFWHFGRGLPDYHQLAHYEPPITTRVYGGDGRLVAEY 62

Query: 72  GEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQ----- 126
             ++R+ + L  +P+ + +A ++ ED  +Y H G DP+GI RA    L +          
Sbjct: 63  AVEKRVFVPLPVIPQLVKDAFLSAEDKNFYTHAGIDPVGIARAIVVNLKNRGKGADRRPV 122

Query: 127 GASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGV 186
           GASTITQQ+A+NF L+NE  + RKVKE  +A+ IE+  SK  ILELYLN+IYLG  +YGV
Sbjct: 123 GASTITQQVAKNFLLTNEVSIERKVKEAILALRIERTFSKDHILELYLNEIYLGSGAYGV 182

Query: 187 GAAAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYIT 246
            AAA  YF K + +L + E A +A LPKAP+  NP    + A  RR+ V+ R+ ++  IT
Sbjct: 183 AAAALNYFDKGLDELNVAEAAYLAALPKAPNNYNPHRHPQAAKERRDWVIGRLFEDGKIT 242

Query: 247 KAEYDAARAEPV-LPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSK 305
           +AEY A  A P+ +      +      Y AE  R  +  +YGE A +  G+ V  ++D+ 
Sbjct: 243 QAEYQAMVAMPLEVRTRKEMQATQGGDYFAEDIRRELQAKYGESALWKGGLVVRASMDAH 302

Query: 306 LQRAANQAAINNLLAYDERHGYRGAEKELWQVNQPAWSSTQLSEYLSNEPTYGD----MF 361
           LQ   ++     L AYD RHG+RG    +     PA  +      L+  P  G       
Sbjct: 303 LQAVGSRVLRQGLAAYDRRHGWRGPITRI-----PA--AAGWGPLLAAVPRPGGADEAWQ 355

Query: 362 PAAVLSVEEKSAQVWVKSYGVQTIAWEDMNWARRFINDDRQGPLPKSANEFLAAGQQIWV 421
            A VL++ +  A + +    V  + + +M WAR  +     GP P+   + +A G  I V
Sbjct: 356 TAVVLALTDHEATLGLVGGKVGHVPFAEMKWARPTLERSATGPFPRKPADVVALGDVILV 415

Query: 422 RP--RTQDG---AITAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSV 476
            P  +  DG       + L Q+P    A VA++P  G V A+VGG+++  ++FNRA+Q++
Sbjct: 416 EPVAKGDDGKPYPANFFTLRQIPKVEGALVAIDPHTGRVMAMVGGWSYGKSQFNRASQAM 475

Query: 477 RQVGSSIKPFIYSAALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIG 536
           RQ GSS KPFIY AAL  G T ++L+ DAPI          WRPKN    Y GPT LR+G
Sbjct: 476 RQTGSSFKPFIYLAALESGYTPSSLVLDAPIALPQGPGLPLWRPKNYHDDYLGPTTLRVG 535

Query: 537 LAQSKNVMAVRVLREVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVF 596
           + +S+N+M VR+ + +G+D+  +Y  RFG   D LPR  ++ALGAG  TP+++   +++ 
Sbjct: 536 IEKSRNLMTVRLAQALGMDKVADYAGRFGI-YDNLPRQLSMALGAGETTPLRLTAAYAML 594

Query: 597 ANNGYFVEPFYISRVENPFGNIEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQ 656
            N G  V P  I R+++  G   FS + +      CS+  + F  QD   P  P +  + 
Sbjct: 595 VNGGKKVRPTLIDRIQDRNGKTIFSHDLRFC--DGCSA--NRFTGQD--MPLLPDIREQM 648

Query: 657 NAFLTREMLYSNIWGGGEWSSDTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAP 716
              ++   + S + G  +  + T     G        + + GKTGT+NDS D W+ G++P
Sbjct: 649 VDPVSAYQMVSILEGVVQRGTGTSVKPVG--------KPLAGKTGTSNDSNDVWFVGFSP 700

Query: 717 GIVGVAWVGFDDHSRNLGKTAPNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQQK 776
            +    +VGFD+                 +   E+GG  A P + +FM  AL+D P    
Sbjct: 701 DLAVGVFVGFDE--------------PGTLGAKETGGSIAAPIFRDFMMEALKDKPPTPF 746

Query: 777 AVPNNIARVRIDRDTGLLTNKLDSSSMFEYFE 808
            VP+ +  VR++  TG      D+ +++E F+
Sbjct: 747 RVPSGVRLVRVNAHTGKPAMPGDAKAIYEAFK 778