Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 703 a.a., carboxypeptidase from Magnetospirillum magneticum AMB-1

 Score =  180 bits (457), Expect = 2e-49
 Identities = 117/314 (37%), Positives = 179/314 (57%), Gaps = 16/314 (5%)

Query: 12  KFIKRLLVFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVF-SQDGKLIAQ 70
           K+ KRLLV+ L   I     + G   Y   DLPD+  +   Q + P  VF S +G++ A 
Sbjct: 67  KWGKRLLVWGLTLAIWIGIGLAGVVAYYALDLPDIDRMT-AQTRRPSVVFQSVEGEIFAA 125

Query: 71  FGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGAST 130
           +G+    PL L EM   + +AV+ATED R+Y H+G DPIG+ RA F  L +G   QG ST
Sbjct: 126 YGDLYGEPLDLGEMSPFIAQAVLATEDRRFYSHWGVDPIGLARALFVNLRAGHTVQGGST 185

Query: 131 ITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAA 190
           ITQQLA+N FL+ ++ + RKV+E+ +A+ +E+  SK++IL LYLN++YLG  ++GV AAA
Sbjct: 186 ITQQLAKNLFLTPDRNMKRKVQEVLMALWLEKRFSKEQILGLYLNRVYLGSGTFGVDAAA 245

Query: 191 QAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEY 250
           + YF    + + + + A++AGL KAPS  +P+   E +  R + VL  M+   YI +   
Sbjct: 246 KRYFDVSARKVDVYQAAVLAGLLKAPSRYSPLNDPEASRKRTSDVLANMVKAGYIDQKTA 305

Query: 251 DAARAEPVLPKYHGAEIELNAPYVA-EIARAWM---VERYGEEAAYTSGMNVYTTVDSKL 306
           D  +         GA   +  P  A      W+   ++++GE A     + V+TT+D  L
Sbjct: 306 DNVQVT-------GAAQLVRRPIPAGRYFADWLMANLDQFGEVAG--KDIVVHTTMDIAL 356

Query: 307 QRAANQAAINNLLA 320
           QR   +A +  ++A
Sbjct: 357 QRKV-EADLKTMMA 369



 Score =  135 bits (341), Expect = 6e-36
 Identities = 99/336 (29%), Positives = 149/336 (44%), Gaps = 57/336 (16%)

Query: 444 AFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLATLIN 503
           A V M+P+ GA+ AL GG ++  ++FNRATQ +RQ GSS KPF+Y  A+  G T    + 
Sbjct: 381 AVVVMSPD-GAIRALTGGKDYDDSQFNRATQGLRQPGSSFKPFVYLTAMEMGRTPDDEVE 439

Query: 504 DAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYLTR 563
           D PI   +      W P N    Y GP  LR  LA+S N +AVR++ EVG         R
Sbjct: 440 DKPIRLGN------WSPGNYTGKYLGPITLRQALAESVNTVAVRLVEEVGPGRVIATARR 493

Query: 564 FGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSAE 623
            G   D L    T+ALG   ++ +++   ++  AN GY V  F +S + +P G       
Sbjct: 494 LGITSD-LRNDATLALGTSEVSLLELTTAYAALANGGYGVTSFGVSHITDPSG------- 545

Query: 624 PKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGWNG 683
            KV+  R+                 +P  +S  +  ++  +                  G
Sbjct: 546 -KVLYQRQGGG---------FGQVVSPAALSRMHDMMSAVVT----------------QG 579

Query: 684 TGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNRNIE 743
           +G  A+    R + GKTGTT D +DAW+ G+    V   W+G DD+   + K        
Sbjct: 580 SGKAARL--DRPVAGKTGTTQDYRDAWFMGFTADYVAGVWMGNDDYRIEMKKV------- 630

Query: 744 DDVSGAESGGKTALPAWVEFMSLALQDVPVQQKAVP 779
                  +GG      W + M+ A + +P +    P
Sbjct: 631 -------TGGGLPAQLWKQVMTAAHRGLPARPLRTP 659