Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 850 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  881 bits (2277), Expect = 0.0
 Identities = 451/865 (52%), Positives = 589/865 (68%), Gaps = 55/865 (6%)

Query: 11  VKFIKRLLVFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQ 70
           VKF+K LL+ ++ CI+LG  +I+G Y Y++  LPDVATL+DV+LQ PMQV+S DG+LIAQ
Sbjct: 1   VKFVKYLLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRLQIPMQVYSADGELIAQ 60

Query: 71  FGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGAST 130
           +GEKRRIP+ L+++P E+I A IATEDSR+YEH+G DP+GI RAA   L SG ASQGAST
Sbjct: 61  YGEKRRIPVTLDQIPPEMINAFIATEDSRFYEHHGIDPVGIFRAASVALFSGHASQGAST 120

Query: 131 ITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAA 190
           ITQQLARNFFLS E+ +MRK+KE F+AI IEQLL+K EILELYLNKIYLGYR+YGVGAAA
Sbjct: 121 ITQQLARNFFLSPERTLMRKIKEAFLAIRIEQLLNKNEILELYLNKIYLGYRAYGVGAAA 180

Query: 191 QAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEY 250
           Q YFGK V  L+L E+A+IAGLPKAPST NP+YS++RA  RRNVVL RML E YIT+A+Y
Sbjct: 181 QVYFGKTVDQLSLSEMAVIAGLPKAPSTFNPLYSMDRAIARRNVVLSRMLSEGYITQAQY 240

Query: 251 DAARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAA 310
           D AR+EP+   YH  EI  +APY++E+ R  M  RYG E+AY  G  +YTT+  K+Q+AA
Sbjct: 241 DQARSEPIDANYHAPEIAFSAPYLSEMVRQEMYNRYG-ESAYEDGYRIYTTITRKVQQAA 299

Query: 311 NQAAINNLLAYDERHGYRGAEKELWQVNQPAWSSTQLSEYLSNEPTYGDMFPAAVLSVEE 370
            QA  NN+L YD RHGYRG    LW+V + AW S ++++ L   PTYG + PA V S   
Sbjct: 300 QQAVRNNVLDYDMRHGYRGPANVLWKVGETAWDSKKITDTLKALPTYGPLLPAVVTSANP 359

Query: 371 KSAQVWVKSYGVQTIAWEDMNWARRFINDDRQGPLPKSANEFLAAGQQIWVRPRTQDGAI 430
           + A   +      ++  E M WAR + +D +QGP P+   + +  GQQIWVR    D   
Sbjct: 360 QEATAALADGTSVSLHMEGMRWARPYRSDTQQGPTPRKVTDVVQTGQQIWVRQVDND--- 416

Query: 431 TAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSA 490
             W L QVP  N+A V++NP+ GAV ALVGGF+F  +KFNRATQ++RQVGS+IKPF+Y+A
Sbjct: 417 --WWLAQVPEVNSALVSLNPQTGAVLALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTA 474

Query: 491 ALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLR 550
           A++KGLTLA+++ND PI++WD   G+ WRPKNSPP Y GP RLR GL QSKNV+ VR +R
Sbjct: 475 AMDKGLTLASMLNDVPISRWDAGAGSDWRPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMR 534

Query: 551 EVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISR 610
            +G+D   EYL RFGF    +  +E++ALG+ S TP+Q+A+G++V AN G+ ++P++IS+
Sbjct: 535 AMGVDYAAEYLQRFGFPAQNIVHTESLALGSASFTPMQVARGYAVMANGGFLIDPYFISK 594

Query: 611 VENPFGNIEFSAEPKVVCHREC----------------SSELDEFA----EQDAASP--- 647
           +EN  G + F A+PK+ C  EC                ++ ++E A    +Q++A P   
Sbjct: 595 IENDQGGVIFEAKPKIAC-PECDIPVIYGNTQKSDVLENTNVEEVAVSQEQQNSAVPMPE 653

Query: 648 ----------------YAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGWNGTGWR-AQA 690
                           YAP VI+   AFL +  L +NI+G      + GW GTGWR A+ 
Sbjct: 654 LEQANQALVAQNGTQEYAPHVINTPLAFLIKSALNTNIFG------EPGWMGTGWRAARD 707

Query: 691 LKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNRNIEDDVSGAE 750
           LKRRDIGGKTGTTN SKDAW++GY PG+V   W+GFDDH R+LG+T  +  I+D +SG E
Sbjct: 708 LKRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVWIGFDDHRRDLGRTTASGAIKDQISGYE 767

Query: 751 SGGKTALPAWVEFMSLALQDVPVQQKAVPNNIARVRIDRDTGLLTNKLDSSSMFEYFEAG 810
            G K+A PAW  +M   L+ VP Q    P  I  V IDR TG L +    +S  EYF  G
Sbjct: 768 GGAKSAQPAWDAYMKAVLEGVPEQPLTPPPGIVTVNIDRSTGQLAS--GGNSREEYFIEG 825

Query: 811 TEPTEYVSEHVNESIYSTSSGEELF 835
           T+PT+     V  +I       ELF
Sbjct: 826 TQPTQQAVHEVGTTIIDNGETHELF 850