Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 773 a.a., penicillin-binding protein 1B from Kangiella aquimarina DSM 16071

 Score =  164 bits (415), Expect = 2e-44
 Identities = 98/270 (36%), Positives = 152/270 (56%), Gaps = 9/270 (3%)

Query: 46  VATLRDVQLQTPMQVFSQDGKLIAQFGEKR---RIPLKLEEMPKELIEAVIATEDSRYYE 102
           V  L+D  L  P+Q+   D  LI Q    R   RI +KLE++P+ LI+A+I TED  +YE
Sbjct: 146 VNQLKDHVLGEPLQMARLDPLLIGQIYPNRLEDRILVKLEQIPEHLIKALIITEDRDFYE 205

Query: 103 HYGFDPIGITRAAFAVLASGSASQGASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQ 162
           H G  P  I RA +  + S   +QG ST+TQQL +N+FL+NE+ + RK +E  +++ +E 
Sbjct: 206 HSGVSPKAIARALWHNITSDGGTQGGSTLTQQLVKNYFLTNERSLWRKFREAVMSVLLEV 265

Query: 163 LLSKQEILELYLNKIYLGYRS----YGVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPST 218
              K EILE Y N++Y G       +GVG A++ +F K+V++LT  + AL+  + K PS 
Sbjct: 266 HYEKDEILEAYFNEVYFGQDGPRAIHGVGLASRFFFDKDVENLTPAQSALLVAILKGPSV 325

Query: 219 MNPIYSVERATNRRNVVLQRMLDEKYITKAEYDAARAEPVLPKYHGAEIEL-NAPYVAEI 277
            +P    E A  RRN+VL+ M     +T+ E    + +  L       I L N P   ++
Sbjct: 326 YDPRRHPENAMKRRNLVLELMHQSGTLTERELKQEK-QTTLSLVRKPSIHLSNVPAFMDL 384

Query: 278 ARAWMVERYGEEAAYTSGMNVYTTVDSKLQ 307
            R  + + Y ++   + G+NV+TT+D  +Q
Sbjct: 385 VRRQLQDSYSDDELNSEGLNVFTTLDPVIQ 414



 Score =  111 bits (277), Expect = 2e-28
 Identities = 98/376 (26%), Positives = 169/376 (44%), Gaps = 63/376 (16%)

Query: 444 AFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAAL--NKGLTLATL 501
           A +  + ++G + A++G        +NRA  + RQ+GS IKPF+  AAL  N    L++ 
Sbjct: 442 AAIISDSQSGHILAVIGDRKAGFAGYNRAIDARRQIGSVIKPFVMLAALEQNPDYNLSSN 501

Query: 502 INDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYL 561
           I+D P++  ++  GT W P+N    + G   L   L++S NV   R+ +EVG+    +++
Sbjct: 502 ISDFPLSL-EQRDGTMWEPQNFDRNFHGMVPLYRALSESYNVAMARLGQEVGIQRLADFV 560

Query: 562 TRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFS 621
            + G + +  P  + + LG   LTP+++ Q +   A+NG  ++P  I  V +  G +   
Sbjct: 561 EKSGVEKEVRP-LDALPLGVLELTPLELLQLYQSIASNGMRIKPSSIIAVTDNSGQL--- 616

Query: 622 AEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGW 681
                         L+ +         A +V SE N +L +  +   +  G         
Sbjct: 617 --------------LERYPVT------AERVASELNVYLVKAAMQLAVEEG--------- 647

Query: 682 NGTGWRAQALKRRD----IGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTA 737
                 A+ L+R +      GKTGTTND KD+W+ G +   + V WVG DD+        
Sbjct: 648 -----TAKYLRRSNPFTSFAGKTGTTNDLKDSWFVGLSGEHLAVVWVGRDDNK------- 695

Query: 738 PNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQQKAVPNNIARVRIDRDTGLLTNK 797
            + NI        +G   ALP + +  +  +   P+      +NI    +D  +GLL   
Sbjct: 696 -DANI--------TGSTAALPVFTDLFA-GINTAPI-DIGYHDNIEWKLVDYRSGLLATD 744

Query: 798 LDSSSMFEYFEAGTEP 813
              +++   +  GT P
Sbjct: 745 DCQNAVSVPYLRGTAP 760