Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 827 a.a., bifunctional glycosyl transferase/transpeptidase from Erwinia tracheiphila SCR3

 Score =  147 bits (372), Expect = 2e-39
 Identities = 93/278 (33%), Positives = 148/278 (53%), Gaps = 8/278 (2%)

Query: 61  FSQDGKLIAQFGE---KRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFA 117
           F  D +LI        ++R+ +     P  L++ ++ATED  +Y+H G     I RA  A
Sbjct: 192 FRLDPRLITMLQSPNGEQRLFVPRAGFPDLLVDTLVATEDRHFYQHDGISFYSIGRAFLA 251

Query: 118 VLASGSASQGASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKI 177
            + +G A QG ST+TQQL +N FL+NE+ + RK  E ++A+ ++   SK  ILELYLN++
Sbjct: 252 NITAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALIMDARYSKDRILELYLNEV 311

Query: 178 YLGY----RSYGVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRN 233
           YLG     +  G   A+  YFG+ V +L+L + AL+ G+ K  S  NP  +   A  RRN
Sbjct: 312 YLGQAGNDQIRGFPLASLYYFGRPVDELSLDQQALLVGMVKGASLYNPWRNPTLALERRN 371

Query: 234 VVLQRMLDEKYITKAEYDAARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYT 293
           +VL+ +  +K I +  YD   A P+  +  G  I    P   ++ R  +  + G++    
Sbjct: 372 LVLRLLQQQKVIDQELYDMLSARPLGVQPKGGVI-TPQPAFMQMVRNELQAKLGDKVKDL 430

Query: 294 SGMNVYTTVDSKLQRAANQAAINNLLAYDERHGYRGAE 331
           SG+ ++TT+D   Q AA +A    + A  ++ G    E
Sbjct: 431 SGVKIFTTLDPLSQDAAEKAVEEGVPALRKQRGLNDLE 468



 Score =  107 bits (267), Expect = 3e-27
 Identities = 90/310 (29%), Positives = 138/310 (44%), Gaps = 44/310 (14%)

Query: 426 QDGAITAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKP 485
           ++G     K   + +  TA V ++  +G V A+VGG +     +NRA Q+ R +GS  KP
Sbjct: 452 EEGVPALRKQRGLNDLETAMVIVDRFSGEVRAMVGGADPQFAGYNRALQARRSIGSLAKP 511

Query: 486 FIYSAALNKG--LTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNV 543
             Y  AL++     L T I D PI    +  G  W+P+N    ++G   L   LA S NV
Sbjct: 512 ATYLTALSQPDKYRLNTWIADNPI-ALKQPNGQIWKPQNDDRRFSGQVMLVDALAHSMNV 570

Query: 544 MAVRVLREVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFV 603
             V +   +GL +  +  TR G   DQL     + LGA +LTP+++AQ F   A+ G   
Sbjct: 571 PTVNLGMTLGLPQVVDTWTRLGVAKDQLQPVPAMLLGALNLTPIEVAQAFQTIASGGNRA 630

Query: 604 EPFYISRVENPFGNIEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTRE 663
           +   +  V    G + + + P+                       A + +  Q A+LT  
Sbjct: 631 QLSAVRSVIAEDGTVLYQSFPQ-----------------------AERAVPAQTAYLT-- 665

Query: 664 MLYSNIWGGGEWSSDTGWNGTGWRAQALKRR----DIGGKTGTTNDSKDAWYNGYAPGIV 719
            LY+               GT   A+AL  R     + GKTGTTN+  D+W+ G     V
Sbjct: 666 -LYA--------MQQVAEEGT---ARALGARYAKAHLAGKTGTTNNQIDSWFAGVDGKEV 713

Query: 720 GVAWVGFDDH 729
            + W+G D++
Sbjct: 714 AITWIGRDNN 723