Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 832 a.a., bifunctional glycosyl transferase/transpeptidase from Dickeya dianthicola ME23

 Score =  152 bits (383), Expect = 1e-40
 Identities = 95/296 (32%), Positives = 159/296 (53%), Gaps = 8/296 (2%)

Query: 46  VATLRDVQLQTPMQVFSQDGKLIAQFGE---KRRIPLKLEEMPKELIEAVIATEDSRYYE 102
           ++ ++++  Q     F  D KLI        ++R+ ++    P  L++ +IATED  +YE
Sbjct: 181 LSQIQNMDNQRNFGFFRLDPKLITMLQSPNGEQRLFVQRSGFPDLLVQTLIATEDRHFYE 240

Query: 103 HYGFDPIGITRAAFAVLASGSASQGASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQ 162
           H G     I RA  A L +G A QG ST+TQQL +N FL+NE+ + RK  E ++A+ ++ 
Sbjct: 241 HDGISFYSIGRALIANLTAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALIMDY 300

Query: 163 LLSKQEILELYLNKIYLGY----RSYGVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPST 218
             SK  ILELYLN++YLG     +  G   A+  YFG+ V +L+L + A++ G+ K  S 
Sbjct: 301 RYSKDRILELYLNEVYLGQSGNDQIRGFPLASLYYFGRPVNELSLDQQAMLVGMVKGASL 360

Query: 219 MNPIYSVERATNRRNVVLQRMLDEKYITKAEYDAARAEPVLPKYHGAEIELNAPYVAEIA 278
            NP  + +    RRN+VL+ + +++ I +  Y+   A P+  +  G  I    P   ++ 
Sbjct: 361 YNPWRNPQVTLERRNLVLKLLQNQQVIDEDLYNMLSARPLGVQPKGGVIS-PQPAFMQMV 419

Query: 279 RAWMVERYGEEAAYTSGMNVYTTVDSKLQRAANQAAINNLLAYDERHGYRGAEKEL 334
           R  + +R G++    SG+ ++TT+D   Q AA +A  + + A     G +  E  +
Sbjct: 420 RQELQQRLGDKVNDLSGVKIFTTLDPVSQDAAEKAVEDGIPALRAARGVKDLESAM 475



 Score =  108 bits (271), Expect = 1e-27
 Identities = 86/306 (28%), Positives = 132/306 (43%), Gaps = 36/306 (11%)

Query: 426 QDGAITAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKP 485
           +DG         V +  +A V ++  +G + A+VGG +     FNRA Q+ R VGS  KP
Sbjct: 456 EDGIPALRAARGVKDLESAMVIVDRFSGEIRAMVGGSDAQFAGFNRAMQARRSVGSLAKP 515

Query: 486 FIYSAALNKG--LTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNV 543
             Y  AL+      L T++ D PI+   +  GT W PKN    + G   L   L  S NV
Sbjct: 516 PTYLTALSMPDRYRLNTILADEPISL-KQPNGTVWEPKNYDREFRGRVMLVDALTNSLNV 574

Query: 544 MAVRVLREVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFV 603
             V +   VGLD+  + L + G   +Q+     + LGA SLTP+++AQ +   A+ G   
Sbjct: 575 PTVNLGMAVGLDQVSDTLQKLGIPQNQIQAVPAMLLGAVSLTPMEVAQEYQTIASGGNRA 634

Query: 604 EPFYISRVENPFGNIEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTRE 663
               +  V    G + + + P+                       A + +  Q A+LT  
Sbjct: 635 SLSALRSVIAEDGKVLYQSFPQ-----------------------AERAVPSQAAYLTLY 671

Query: 664 MLYSNIWGGGEWSSDTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAW 723
            +   +  G   S    +              + GKTGTTND +D+W+ G     V + W
Sbjct: 672 GMQQVVERGTSRSLTVKFG----------NYHLAGKTGTTNDLRDSWFAGVDGKEVAITW 721

Query: 724 VGFDDH 729
           VG D++
Sbjct: 722 VGRDNN 727