Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 815 a.a., penicillin-binding protein 1a from Agrobacterium fabrum C58

 Score =  408 bits (1048), Expect = e-118
 Identities = 272/820 (33%), Positives = 425/820 (51%), Gaps = 70/820 (8%)

Query: 19  VFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQFGEKRRIP 78
           V  L   ++G   + G    V  DLPD A L   +     +V + +G L+A++  ++R+ 
Sbjct: 14  VLFLCAAVVGAIYLHG----VTKDLPDYAVLSTYEPPVTTRVHAGNGALMAEYAHEKRLF 69

Query: 79  LKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVL---ASGSASQGASTITQQL 135
           L ++ +P  +  A ++ ED  +Y H G D  G+ RA    L    SG    GASTITQQ+
Sbjct: 70  LPIQAIPDRVKAAFLSAEDKNFYNHPGVDIWGLGRAILVNLQNLGSGRRPVGASTITQQV 129

Query: 136 ARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAAQAYFG 195
           A+NF L+N++ + RK+KE  ++  IEQ  SK +ILELYLN+I+ G  SYG+  AA  YF 
Sbjct: 130 AKNFLLTNDQTIDRKLKEAILSFRIEQTYSKDKILELYLNEIFFGLNSYGIAGAALTYFN 189

Query: 196 KEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYDAARA 255
           K V +LT+ E A +A LPK P+  +PI   + A  RR+ V+ RM +  YIT A+   A+ 
Sbjct: 190 KSVTELTIAETAYLASLPKGPANYHPIRREKAALERRDWVIDRMAENGYITVADATDAKK 249

Query: 256 EP--VLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAANQA 313
           +P  V  +  GA I   + Y AE  R  +VE+YGEEA    G++V T+ D ++Q  A +A
Sbjct: 250 QPLGVNLRRGGAHIAA-SDYFAEEVRRQIVEKYGEEALLEGGLSVRTSFDPQIQMEARKA 308

Query: 314 AINNLLAYDERHGYRGAEKELWQVNQPAWSSTQLSEYLSNEPTYGDMFPAAVLSVEEKSA 373
             + L+ YDER G+RG  +++    + A   T     +       +   A VL+V     
Sbjct: 309 LQDGLVQYDERRGFRGPIEKI----ETAGDWTAALAKVKGLRDVPEWKVAVVLAVAADGV 364

Query: 374 QVWVKSYGVQT--------------IAWEDMNWARRFINDDRQGPLPKSANEFLAAGQQI 419
            +     GVQ               I+ E+M WA  F +   +    KS    + AG  +
Sbjct: 365 DI-----GVQADPDAEDGDKRTRGHISAENMRWA--FRDASGKKATSKSPVGVVTAGDVV 417

Query: 420 WVRPRTQDGAITAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQV 479
           + +P +  G    ++L Q P      V M+P  G V A+VGGF++  ++FNR+TQ++RQ 
Sbjct: 418 YAQPLSGSG--NEYRLRQPPKVQGGMVVMDPHTGRVLAMVGGFSYAQSEFNRSTQAMRQP 475

Query: 480 GSSIKPFIYSAALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQ 539
           GSS KPFIY+AAL+ G T A++I DAPI     S G  W+P+N      GP+ LR+G+ +
Sbjct: 476 GSSFKPFIYAAALDNGYTPASVILDAPIEV--VSGGQVWKPQNYGGGSAGPSTLRLGIEK 533

Query: 540 SKNVMAVRVLREVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANN 599
           S+N+M VR+ +++G++   EY  RFG   D++P   +++LG+G  T ++M   +SV AN 
Sbjct: 534 SRNLMTVRLAQDMGMNLVAEYAERFGI-YDKMPPLLSMSLGSGETTVMRMVSAYSVLANG 592

Query: 600 GYFVEPFYISRVENPFGNIEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAF 659
           G  ++P  I R+++ +G   F  E +      C++   +  ++        +V+    A+
Sbjct: 593 GKQIKPTLIDRIQDRYGKTIFRHEERGC--EGCNATSWQNQDEPVIVDNREQVLDPMTAY 650

Query: 660 LTREMLYSNIWGGGEWSSDTGWNGTGWRAQALK-RRDIGGKTGTTNDSKDAWYNGYAPGI 718
            T  ML              G    G  A  +K    + GKTGTTND KDAW+ GY P +
Sbjct: 651 QTTSML-------------EGVVKRGTAAGKIKVDLPVAGKTGTTNDEKDAWFVGYTPDM 697

Query: 719 VGVAWVGFDDHSRNLGKTAPNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQQKAV 778
           V   ++GFD         AP       +    +GG  + P + EF++ A + +   +  V
Sbjct: 698 VAGLYIGFD-------SPAP-------LGRGGTGGSLSAPIFGEFIADAAKHLEPSKFIV 743

Query: 779 PNNIARVRIDRDTGLLTNKLDSSSMFEYFEAGTEPTEYVS 818
           P  +  V ++R TG+   + +  ++ E F+ GT P    S
Sbjct: 744 PAGMNFVAVNRKTGMAAAEGEPDTIMEAFKPGTGPASTFS 783