Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 800 a.a., Penicillin-binding protein 1B from Acinetobacter radioresistens SK82

 Score =  159 bits (401), Expect = 8e-43
 Identities = 97/254 (38%), Positives = 138/254 (54%), Gaps = 5/254 (1%)

Query: 76  RIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTITQQL 135
           R+ +KL  +PK LIEA+IATED  +Y H+G    GI RA  + L +G   QG ST+TQQL
Sbjct: 157 RVLIKLNRVPKPLIEALIATEDRNFYHHHGVSVRGIARALVSNL-TGGRRQGGSTLTQQL 215

Query: 136 ARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLG----YRSYGVGAAAQ 191
            +NF+LS EK   RK+ E  +A+ IE    K EILE YLN++ LG    Y   G G A+Q
Sbjct: 216 VKNFYLSPEKTYKRKINEALMAMLIELHYDKDEILEAYLNEVNLGQNGNYSINGYGLASQ 275

Query: 192 AYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYD 251
            YFG  +++L + + A + GL + PS  NP  + E A  RRNVVL+ M    Y+T+AEY+
Sbjct: 276 FYFGLPLRELNISQQAFLVGLVQGPSLYNPWRNPEAAKKRRNVVLKNMQVMGYLTEAEYE 335

Query: 252 AARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAAN 311
              A P+             P   +I R  +   Y +      G+ ++TT+D   Q    
Sbjct: 336 DESARPLNVISKPTLGPAKFPDFLDIVRRQLRTEYQDGDLTNRGLRIFTTLDPIAQTRVQ 395

Query: 312 QAAINNLLAYDERH 325
            A  N++    +R+
Sbjct: 396 TAFKNSVERLSKRN 409



 Score =  112 bits (281), Expect = 6e-29
 Identities = 106/370 (28%), Positives = 166/370 (44%), Gaps = 56/370 (15%)

Query: 437 QVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKG- 495
           ++ N   A +  +PENG + A VG        FNRA  + RQVGS +KP IY +A+  G 
Sbjct: 412 RLKNLQGAVLIAHPENGELIAAVGSTQDFTG-FNRALDAKRQVGSLLKPVIYLSAIESGR 470

Query: 496 LTLATLINDAPIN-QWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGL 554
            T A+ I DA I+   D+S+   W PKN      G   +   LA S N+ AVR+ +E GL
Sbjct: 471 YTWASSIQDAAISIPIDKSK--EWTPKNYAGGEYGVVSMMQALANSYNLSAVRLGQEFGL 528

Query: 555 DETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENP 614
                 L +FG     +P   +I LGA  ++P+++   +  FA  G+   P  I  V + 
Sbjct: 529 STFTNQLRKFGV-TSNIPAFPSIFLGAVEMSPMEVMSIYENFATGGFKYPPRAIRTVVDA 587

Query: 615 FGNIEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGE 674
            G +                 LD +           + I   +A++    L   +     
Sbjct: 588 DGRL-----------------LDRYGLD------VQQTIDPSSAYILNYGLQQVM----- 619

Query: 675 WSSDTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLG 734
            +  TG +       +LK   + GK+GTTND++D+W+ GY+   + V W+G D++     
Sbjct: 620 -NIGTGRSAYNSFPASLK---LAGKSGTTNDTRDSWFAGYSGNHLAVVWLGLDNNK---- 671

Query: 735 KTAPNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQQKAVPNNIARVRIDRDTGLL 794
                      V+G  +G   ALP W+  M   L+  PV  +   +N+    IDR TG L
Sbjct: 672 -----------VTGL-TGSTGALPVWINVMK-QLKQEPVNLRQT-DNVQWHWIDRATGYL 717

Query: 795 TNKLDSSSMF 804
           + +    +M+
Sbjct: 718 SAQGCEGAMY 727