Pairwise Alignments

Query, 196 a.a., pilus assembly protein PilN from Vibrio cholerae E7946 ATCC 55056

Subject, 178 a.a., Type IV pili biogenesis protein PilN from Pseudomonas putida KT2440

 Score = 76.6 bits (187), Expect = 2e-19
 Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 2/159 (1%)

Query: 6   KVNLLPWRDARREAHKRRFLGLVTLGVLLAVLMQFAAGEYLGGQMALQQERIGYLQQHIF 65
           ++NLLPWR+ +R+A  RRF G +  G LLA+       + L  Q   QQ      +Q   
Sbjct: 3   RLNLLPWRERQRQAALRRFRGQLIAGALLALCAVMLVDQ-LARQRGQQQVLANTQRQATL 61

Query: 66  SL-DQQIAKLKIAEEEHKALLTRLTVVEQLQQKRNKTTEFMNQMPNLIPEGVYVDKIKMN 124
            + D+Q+  L     +H+ALL R   +E L+  +         +   +PEGV +  + ++
Sbjct: 62  DIQDEQLQPLAEVRAQHEALLARAVALEGLRAHQGVLAGVFADLEGALPEGVQLIGLSLD 121

Query: 125 GHQIEITGISDSTARLATMLDNLEKSDKLTDVEMHEIVS 163
             ++++TG++ S A +A  + +L +S+ L D+E+  I S
Sbjct: 122 SGRLQVTGLAASGAVVAQFMRDLNRSNVLLDLELKRIKS 160