Pairwise Alignments

Query, 578 a.a., type IV pilus secretin PilQ from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., Type IV pilus biogenesis protein PilQ from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  261 bits (666), Expect = 5e-74
 Identities = 156/415 (37%), Positives = 247/415 (59%), Gaps = 33/415 (7%)

Query: 166 ISINFQDIPVRNVLQLIADYNGFNLVVSDSVVGNLTLRLDGVPWQQVLDIILQVKGLDKR 225
           +++   D+PV  VLQ +A+    NLVVS  V G L+L L  VPW+Q L  ++   GL  R
Sbjct: 1   VTLVVDDVPVVQVLQTLAEQERQNLVVSPDVSGTLSLHLTDVPWKQALQTVVNSAGLVLR 60

Query: 226 VDGNVILIAPKE-ELDLREKQALEKARLAEELGDLKSEIIKINFAKASDIAAMIGGEGNV 284
            +GN++ +  +  + +   +Q  E+ R    L  L++  I + +A A ++A    GE   
Sbjct: 61  QEGNILHVHSQAWQKEHSARQDAERLRFQANL-PLENRSISLQYADAGELAK--AGE--- 114

Query: 285 NMLSERGSISIDERTNSLLIRELPDNIAVIREIIESLDIPVKQVQIEARIVTVKEGNLEE 344
            +LS +G+I +D+RTN LL+R+    +A + + +  +D+PV QV++ A IVT+ E +L E
Sbjct: 115 KLLSAKGTIMVDKRTNRLLLRDNRAALAELEKWVSQMDLPVAQVELAAHIVTINEKSLRE 174

Query: 345 LGVRWGVMSTNGSHSVGG--SIESNLWQKGLLADDEFPVDEFLNVNLASTSANASSIAFQ 402
           LGV+W +     + SVG   ++ S+L                      S +A  S + F 
Sbjct: 175 LGVKWTLADATQAGSVGDVTTLSSDL----------------------SVAAATSRVGFN 212

Query: 403 VAKLGSGTLLDLELSALQNESKAEIISSPRLITTNKQPAYIEQGTEIPY-LESSSSGAST 461
           + ++ +G LLDLELSAL+ +   +II+SPRL+ ++ QPA I+QG+EIPY + S  SGA++
Sbjct: 213 IGRI-NGRLLDLELSALEQKQLLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS 271

Query: 462 VAFKKAVLSLKVTPQITPDNRLVLDLSVTQDRRGETVKTGTGEAVSIDTQRIGTQVLVNN 521
           V FK+AVL ++VTP +    R+ L L ++Q+  G+ ++   GE ++ID Q I TQV V +
Sbjct: 272 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 331

Query: 522 GETVVLGGIFQHSINNSVDKVPLLGDLPVLGALFRRTYEQMGKSELLIFVTPKVV 576
           GET+ LGGIF     +  D VPLLGD+P LG LFR   ++  + EL++F+TP++V
Sbjct: 332 GETLALGGIFSRKNKSGSDSVPLLGDIPWLGQLFRHDGKEDERRELVVFITPRLV 386