Pairwise Alignments

Query, 578 a.a., type IV pilus secretin PilQ from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., type IV pilus secretin (or competence protein) PilQ from Enterobacter asburiae PDN3

 Score =  246 bits (629), Expect = 9e-70
 Identities = 150/407 (36%), Positives = 233/407 (57%), Gaps = 29/407 (7%)

Query: 172 DIPVRNVLQLIADYNGFNLVVSDSVVGNLTLRLDGVPWQQVLDIILQVKGLDKRVDGNVI 231
           D+PV  VLQ +      NLV+S  V G L+L L  VPW+Q L  ++   GL  R +G + 
Sbjct: 4   DVPVVQVLQSLVAQENRNLVISPDVGGTLSLNLTRVPWRQALQTVVTSAGLVLREEGGIF 63

Query: 232 LIAPKE-ELDLREKQALEKARLAEELGDLKSEIIKINFAKASDIAAMIGGEGNVNMLSER 290
            +     + + +E+   E+AR   +   L S  I  ++A A ++      +    +LS +
Sbjct: 64  YVHTAAWQREQQERSEQERARRQLD-APLVSHGIAFSYADAGELQ-----KDAEKLLSPK 117

Query: 291 GSISIDERTNSLLIRELPDNIAVIREIIESLDIPVKQVQIEARIVTVKEGNLEELGVRWG 350
           GS+S+D+RTN LLIR+    +  ++     +DIPV+QV++ A IVT+ E +L ELGV+W 
Sbjct: 118 GSLSLDKRTNRLLIRDNQTVVETLQRWAAQMDIPVEQVELAAHIVTINEKSLRELGVKWN 177

Query: 351 VMSTNGSHSVGGSIESNLWQKGLLADDEFPVDEFLNVNLASTSANASSIAFQVAKLGSGT 410
           +     +  VG        Q   L  D             S ++  S + F + ++ +G 
Sbjct: 178 LADAADAGKVG--------QLTTLGSD------------LSVASATSHVGFNIGRI-NGR 216

Query: 411 LLDLELSALQNESKAEIISSPRLITTNKQPAYIEQGTEIPY-LESSSSGASTVAFKKAVL 469
           LLDLELSAL+ + + +II+SPRL+ ++ QPA I+QG+EIPY + S  SGA++V FK+AVL
Sbjct: 217 LLDLELSALEQKQQVDIIASPRLLASHMQPASIKQGSEIPYQVSSGESGATSVEFKEAVL 276

Query: 470 SLKVTPQITPDNRLVLDLSVTQDRRGETVKTGTGEAVSIDTQRIGTQVLVNNGETVVLGG 529
            ++VTP + P  R+ L L ++++  G+ ++   GE ++ID Q I TQV V +GET+ LGG
Sbjct: 277 GMEVTPVVLPGGRVRLKLHISENMPGQVLQQADGETLAIDKQEIETQVEVKSGETLALGG 336

Query: 530 IFQHSINNSVDKVPLLGDLPVLGALFRRTYEQMGKSELLIFVTPKVV 576
           IF        D VP LG +P LG LFR   +   + EL++F+TP++V
Sbjct: 337 IFSQKNKTGSDSVPGLGKIPWLGQLFRHGGKDNERRELVVFITPRLV 383