Pairwise Alignments

Query, 578 a.a., type IV pilus secretin PilQ from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., DNA uptake porin HofQ from Dickeya dianthicola ME23

 Score =  284 bits (726), Expect = 6e-81
 Identities = 168/416 (40%), Positives = 260/416 (62%), Gaps = 24/416 (5%)

Query: 163 GKLISINFQDIPVRNVLQLIADYNGFNLVVSDSVVGNLTLRLDGVPWQQVLDIILQVKGL 222
           G+ +S+ F D+PV+ VLQ +AD+   NLVV+  V GN++L L  VPWQQ LDIIL++  L
Sbjct: 32  GEPVSLAFDDVPVQRVLQALADHQQLNLVVAPGVTGNVSLNLQQVPWQQALDIILRMGQL 91

Query: 223 DKRVDGNVILIAPKEELDLREKQALEKARLAEELGDLKSEIIKINFAKASDIAAMIGGEG 282
                G+V+++ P   +  R++Q  E A    +   L++  + + +A+A+D+   +  + 
Sbjct: 92  TIERQGSVMMVYPDAYMKDRQRQQEELAAKQRQQLPLQNLSVTLQYAEAADVVTSLQSQR 151

Query: 283 NVNMLSERGSISIDERTNSLLIRELPDNIAVIREIIESLDIPVKQVQIEARIVTVKEGNL 342
              +L+ERGS+++D+RTN+LL+R++   +  IR  I  LD P+ QVQ+ A IVT+   +L
Sbjct: 152 G-TLLTERGSVTVDKRTNTLLVRDVVAALEQIRPWIGELDKPLAQVQLAAHIVTISSEHL 210

Query: 343 EELGVRWGVMSTNGSHSVGGSIESNLWQKGLLADDEFPVDEFLNVNLASTSANASSIAFQ 402
           + LGV WG+     + + G +++ N +   L      PV+        S + NA    F 
Sbjct: 211 KALGVNWGL---GDAATTGQALQMNNFSVSL------PVE--------SPAINA---GFH 250

Query: 403 VAKLGSGTLLDLELSALQNESKAEIISSPRLITTNKQPAYIEQGTEIPY-LESSSSGAST 461
           +AKL +G LLDLEL AL+ E++ EII+SPRL T ++Q A I+QGTEIPY + S +SG+++
Sbjct: 251 LAKL-NGRLLDLELMALEQENEVEIIASPRLFTAHQQTASIKQGTEIPYQVSSGASGSTS 309

Query: 462 VAFKKAVLSLKVTPQITPDNRLVLDLSVTQDRRGETVKTGTG-EAVSIDTQRIGTQVLVN 520
           + FK+AVL ++VTP+I    ++ L L ++Q+  G  +K G G E ++ID Q I TQV V 
Sbjct: 310 IEFKEAVLGMEVTPRILHGGQITLSLLISQNMPGRAIKQGEGSEILAIDKQEIQTQVTVQ 369

Query: 521 NGETVVLGGIFQHSINNSVDKVPLLGDLPVLGALFRRTYEQMGKSELLIFVTPKVV 576
           +GET+VLGGIFQ   N    +VP LG LP +G  FR   +Q  + EL+IF+TP ++
Sbjct: 370 DGETIVLGGIFQQQKNQGERQVPGLGALPGIGQWFRSDNQQHTRRELVIFITPTLI 425