Pairwise Alignments

Query, 578 a.a., type IV pilus secretin PilQ from Vibrio cholerae E7946 ATCC 55056

Subject, 695 a.a., type II secretion system secretin GspD from Dickeya dianthicola ME23

 Score = 99.0 bits (245), Expect = 6e-25
 Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 32/293 (10%)

Query: 293 ISIDERTNSLLIRELPDNIAVIREIIESLDIPVKQVQIEARIVTVKEGNLEELGVRWGVM 352
           +  D   N+L++   P  +     II+ LD+  +QV +EA +V V++     LG+ WG  
Sbjct: 368 VHADRDNNALVVSAPPAAMQQAASIIQQLDVRHEQVLVEAIVVEVQKAEGLNLGIAWGNK 427

Query: 353 STNGSH----SVGGSIESNLWQKGLLADDEFPVDEFLNVNLASTSANASSIAFQVAKLGS 408
           +  GS+    +VG            L   E  V  F + N                    
Sbjct: 428 NYGGSNFNSINVGNGFSQANPLVNALKGTEGLVAGFYHGNW------------------- 468

Query: 409 GTLLDLELSALQNESKAEIISSPRLITTNKQPAYIEQGTEIPYLESSSSGAS-----TVA 463
           GTL +    AL++     I+++P ++T +   A    G ++P L  S +  +     TV 
Sbjct: 469 GTLFN----ALESNKSNNIVATPSVVTLDNHRAEFNVGQDVPILTGSQTTNNDNIFNTVQ 524

Query: 464 FKKAVLSLKVTPQITPDNRLVLDLSVTQDRRGETVKTGTGEAVSIDTQRIGTQVLVNNGE 523
            +   +   + P+I     ++L +S       +T +         + + +   V V + E
Sbjct: 525 RRTIGIKFSILPRINQSGTILLTISQEISSLSDTAQVNNNLGAVFNIRTVNNVVQVQDNE 584

Query: 524 TVVLGGIFQHSINNSVDKVPLLGDLPVLGALFRRTYEQMGKSELLIFVTPKVV 576
           TVV+GG+       +V+KVPLLGD+P LG +FR T     K  L++F+ P+++
Sbjct: 585 TVVIGGLLDDEKKETVNKVPLLGDIPWLGNVFRYTSHNDDKRNLMLFIRPRII 637