Pairwise Alignments

Query, 174 a.a., shikimate kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., helix-turn-helix domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 63.2 bits (152), Expect = 4e-15
 Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 4/173 (2%)

Query: 4   KRNIFLVGPMGAGKSTIGRHLAQQLHMEFIDSDTVIEERTGADIAWVFDVEGEEGFRKRE 63
           KR + L+G  GAGK+T+G  +A +    F    ++IE+  G D+  +    G++G+RK E
Sbjct: 117 KRRVALIGLRGAGKTTLGEAVAGRFAAPFRRITSMIEQMAGMDMTEILLSTGQKGYRKLE 176

Query: 64  EAVINDLTEQQGIVLATGGGSVISKENRNRLSARG-IVVYLETTIEKQLART-NRDKKRP 121
            + + +  E Q  ++   GGS++S+     L  +    ++++ + E  + R   +   RP
Sbjct: 177 YSALENTLEAQPTMVLEAGGSLVSEPRTFELLLQSCFTIWVQASPEDHMRRVMGQGDLRP 236

Query: 122 LL-QTDCPREVLEQLAEDRNPLYEEIADITVRTDDQSAKVVANQIVKMLEEHI 173
           +  Q     E L+ + E R  LY   AD  + T  +S      ++ ++   H+
Sbjct: 237 IAGQQMAAMEDLKAILEARRHLYGR-ADAVINTSGRSIADSVEEMSRLCAPHL 288