Pairwise Alignments

Query, 277 a.a., DNA adenine methylase from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., site-specific DNA methylase from Magnetospirillum magneticum AMB-1

 Score = 47.0 bits (110), Expect = 5e-10
 Identities = 65/273 (23%), Positives = 112/273 (41%), Gaps = 29/273 (10%)

Query: 6   AFLKWAGGKYSLVEDIQRHLPE-ARELVEPFVGAGSVFLNTDFE--RYLLADINPDLINF 62
           A  ++ GGK    + I   +P+   E+  PF+G G+V L+      R    D+   L+N 
Sbjct: 2   AIFRYPGGKERGKQTIISFIPDDVDEVCSPFLGGGAVELDLGQRGIRVHGYDLFEPLVNC 61

Query: 63  YNLLKTEPQAYIHEAKRWFVPENNRKEVYLDIRKQFNQSDDAMFRSLAFLYMNRFGFNGL 122
           +  +  +  A + +A R + P +  ++ +  ++K +    D + ++ A+  +NR  ++GL
Sbjct: 62  WQQIGIDAGA-VADAARQYHPLD--RDGFYQLQKTYFSIPDPVMQAGAYFALNRASYSGL 118

Query: 123 CRYNKKGGFNVPFGSYKKPYFPEQELEFFAEKAQRATFICASYGETFARAQSDSVIYCDP 182
                   F+   G Y    F    +   A        I  +   T      D+  Y DP
Sbjct: 119 T-------FS---GGYSGERFTTSCINKLARTTIPNISIQQADFSTSLSWHPDAFAYLDP 168

Query: 183 PYAPLSTTANFTSYAGNGFTLDDQAALADIAEKTAKERGISVLISNHDTTHTRRLYRGAQ 242
           PY      +N     G+     D   LAD+        G  +L  N+D T  RRLY G  
Sbjct: 169 PYLLPPEKSNLYGIKGDAHRNFDHVRLADVLR---SRPGCWLLSYNNDET-VRRLYEGFA 224

Query: 243 LNVVKANRTISRNGA-GRNKVDELLALFTPHLS 274
           +        +S + A G  KV   L +F+ +L+
Sbjct: 225 M--------VSASWAYGTGKVGAELLVFSHNLA 249