Pairwise Alignments

Query, 277 a.a., DNA adenine methylase from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., site-specific DNA methylase from Magnetospirillum magneticum AMB-1

 Score = 62.0 bits (149), Expect = 1e-14
 Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 27/275 (9%)

Query: 6   AFLKWAGGKYSLVEDIQRHLPE-ARELVEPFVGAGSVFLNTDFERYLLA--DINPDLINF 62
           A  ++ GGK    + I   +P+   E++ PF+G G+V L+       +   D+   L N 
Sbjct: 2   AIFRYPGGKERGKKTIASFIPDDVDEVISPFIGGGAVELDLGQRGIQVHGFDVFAPLTNC 61

Query: 63  YNLLKTEPQAYIHEAKRWFVPENNRKEVYLDIRKQFNQSDDAMFRSLAFLYMNRFGFNGL 122
           +  +K +  A + ++ R F P +  ++ +  ++K +    D + ++ AF  +NR  ++GL
Sbjct: 62  WQQIKFDAGA-VADSARQFHPMD--RDGFYQLQKSYFYILDPVMQAAAFFAINRSSYSGL 118

Query: 123 CRYNKKGGFNVPFGSYKKPYFPEQELEFFAEKAQRATFICASYGETFARAQSDSVIYCDP 182
                 GGF+       + + P    +         T   A +  + +R   D+ +Y DP
Sbjct: 119 ---TFSGGFS------GERFTPSSIDKLARTTIPNITVDQADFELSLSR-HPDTFVYADP 168

Query: 183 PYAPLSTTANFTSYAGNGFTLDDQAALADIAEKTAKERGISVLISNHDTTHTRRLYRGAQ 242
           PY      +N     G+     D + LA++     + R  S L+S +DT   RRLY G  
Sbjct: 169 PYLLTHEKSNLYGLRGDAHRHFDHSLLAEV----LRNRSGSWLLSYNDTEPVRRLYEG-- 222

Query: 243 LNVVKANRTISRNGAGRNKVDELLALFTPHLSSQA 277
             +V A+ T      G  KV   L +F+  L+  A
Sbjct: 223 FAMVAASWTY-----GTGKVGAELLIFSNELADAA 252