Pairwise Alignments

Query, 338 a.a., tryptophan--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., tryptophan-tRNA ligase from Agrobacterium fabrum C58

 Score =  284 bits (727), Expect = 2e-81
 Identities = 155/350 (44%), Positives = 219/350 (62%), Gaps = 18/350 (5%)

Query: 3   KPIVLSGVQPSGELSIGNYLGALRQWQQMQDDYDCQYCVVDLHAITVRQDPQALHEATLD 62
           KP+V SGVQP+G L +GNYLGA+R++  +Q+D DC YCVVD+HAIT +     L   T  
Sbjct: 5   KPLVFSGVQPTGNLHLGNYLGAIRKFVALQEDNDCIYCVVDMHAITAQLVHSDLKAQTRS 64

Query: 63  ALAICLAVGVDPKKSTLFVQSHVPEHAQLGWVLNCYTQMGELSRMTQFKDKSARYANDVN 122
             A  +A G+DP K  +F QS VP+HA+L WV NC  ++G + RMTQFKDKS + A  V+
Sbjct: 65  IAAAFIAAGIDPVKHIVFNQSAVPQHAELAWVFNCVARIGWMERMTQFKDKSGKNAEQVS 124

Query: 123 AGLFGYPVLMAADILLYGAHQVPVGSDQKQHLELARDIATRFN--------------NIY 168
            GL  YP LMAADIL+Y A  VPVG DQKQHLELARDIA +FN              NI 
Sbjct: 125 LGLLAYPSLMAADILVYRATHVPVGDDQKQHLELARDIAQKFNIDFGGHIRNAGLGVNIT 184

Query: 169 SPEQPI---FTIPEPYIPTVNARVMSLQDATKKMSKSDDNRKNVITLLEDPKSIIKKINK 225
             ++P+   F + EP I     RVMSL+D TKKMSKSD +  + I L++D  +I KKI K
Sbjct: 185 VGDEPVHAYFPMVEPLIGGPAPRVMSLKDGTKKMSKSDPSDLSRINLMDDVDAISKKIKK 244

Query: 226 AQTDAETPPRIAYDVENKAGIANLMGLYSAATGKTFAEIEAQYAGVEMYGPFKKDVGEAV 285
           A+TD +  P     ++ +    NL+G+Y+A + KT A++ A++ G + +  FK  + E  
Sbjct: 245 AKTDPDALPSEVEGLKGRPEAENLVGIYAALSDKTKADVLAEFGG-QQFSTFKPALVELA 303

Query: 286 VAMLEPVQAEYQRIRNDREYLNSVMRDGAEKASAKALQTLKKVYAAVGFV 335
           V +L PV  E +R+ +D  ++++++  G E+A   A +T+ +V   +GF+
Sbjct: 304 VNVLAPVNNEMRRLLDDPTHIDAILSQGGERARTIAEKTMNEVRDIIGFL 353