Pairwise Alignments

Query, 869 a.a., nuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 736 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  174 bits (442), Expect = 1e-47
 Identities = 159/541 (29%), Positives = 228/541 (42%), Gaps = 113/541 (20%)

Query: 324 LERYEGMLVKTTPELDMRVTRTFGYDYASRRNNMVLAQGRINMQPNQQHPAGSEQASQQK 383
           LERYEGMLV+ +  L +  T   G     +   +VLA         +Q  A +  ++   
Sbjct: 7   LERYEGMLVEISQPLAVTETYQLG-----QYGQLVLALN------GRQFNATNGNSTSTN 55

Query: 384 LDNAQRRLFVES-DAKAPDGQIPYYPTFGRTDVDQDGSTEDYIRIDDTVSGLEGVVSYSY 442
             N   R+ ++   +++    IPY    G         T+   RI DT   + G++S+S+
Sbjct: 56  AQNMLSRIVIDDGSSRSNPNPIPYLSAAG---------TDGTRRIGDTTQKVTGILSHSF 106

Query: 443 NEYRLIVTNTISAENLVHNAPRQAKPDLDEGDLRIATFNVLNYFNSPFGGD--ANQHGDN 500
             YR+  T    A     + PRQ    +  G L++A+ NVLNYF +   G   A Q G  
Sbjct: 107 GAYRIQPT---VAPVFAQSNPRQPTAPVVGGSLKVASLNVLNYFTTFVDGKNAAGQTGQV 163

Query: 501 -----------RGANNLAEFEVQQAKIVNAIVRLDADIVGLMEIENNGFGEGSAIAQLVN 549
                      RGA+NL EFE QQAKIV AI  LDAD++GLMEI+N        +A L  
Sbjct: 164 CLLGTGFPDTCRGADNLTEFERQQAKIVAAIAGLDADVIGLMEIQNTDIATKDLLAALNA 223

Query: 550 QINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIYRDKVVKLAQNRVIPMPS 609
           ++ +          + A++S            GTD+I   ++Y+   V+     V+P  +
Sbjct: 224 KVGANT--------YAAVNSG---------VFGTDLIKVDILYKPAKVQRVGGVVLPTGA 266

Query: 610 QQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVNHFKSKGSACWEDAAPVE 669
               + + A+G          R  LA  F   G N      VNH KSKGS        ++
Sbjct: 267 DLT-DYIAASG----------RPPLAQRFSAVGNNGGFWFVVNHLKSKGSCL--TTGDID 313

Query: 670 QGGQAGKDLDYQGACENFRVAAAVALGDALAKI----DGHKVILGDMNSYGMEDPMLVLT 725
           QG         QG     R   A AL   ++K+    +   +++GD NSY +EDP  VL 
Sbjct: 314 QG---------QGCWNLARTKQATALNSFVSKLKAMGESDVLMMGDFNSYLLEDPTKVLE 364

Query: 726 DYTPEKYGKTIRAARNTYIAGLEQFGDAGAEIKHSYGYLNAVAMKHPDSWSYSFNDEVGA 785
               E   K + A                                  D ++Y F  E GA
Sbjct: 365 SAGNESLLKRMPAG---------------------------------DRYTYVFGGETGA 391

Query: 786 LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQFRASDHDPAVLELN 845
           LDH   S SL  +V   + WHIN  E  + DYN   K +       FRASDHDP ++ LN
Sbjct: 392 LDHAYASASLATQVSGVSVWHINSDEPPVLDYNTGSKPDDRYAPTPFRASDHDPVLVGLN 451

Query: 846 I 846
           +
Sbjct: 452 L 452



 Score = 73.2 bits (178), Expect = 5e-17
 Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 4/117 (3%)

Query: 22  LVAPSYADLLISQYVEGSS-FNKAIEIANTSDQTVSLNGYQLAMSTNGSGTWDKTLPLDG 80
           L+ P   DL  S+YVEG +  NKAIE+ N +   + L+ Y + +  NG+ T   +L L G
Sbjct: 552 LLPPGPPDLFFSEYVEGKTGSNKAIELYNPTSSALDLSLYTIKLYANGAKTSTNSLKLSG 611

Query: 81  QVIAARDVLVIAHGSANSAILATADLTNNTVVNFNGNDPIALLNSDGSVHDVVGSMG 137
             +A + VLV+ H SA+ A+     + +N VVNFNGND + L  S G V D  G +G
Sbjct: 612 S-LAGKGVLVVVHPSADPALKIAGSIMSN-VVNFNGNDALTLEKS-GVVIDRFGQVG 665