Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase from Xanthobacter sp. DMC5

 Score =  178 bits (451), Expect = 4e-49
 Identities = 135/449 (30%), Positives = 211/449 (46%), Gaps = 31/449 (6%)

Query: 34  KIGFVSLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIG 93
           K+   S GC  N+ DS R+   L  EG+       ++D+VI+NTC   + A ++    +G
Sbjct: 32  KLYVKSFGCQMNVYDSHRMADTLAREGFVETQDPAEADLVILNTCHIREKAAEKVYSELG 91

Query: 94  EALKENGK------VIVTGCLGARED-EIRQVHPNVLGITGPHAYQNVLEHVHQYAPK-- 144
              K+  +      + V GC+   E  EI +  P V  + GP +Y  + E + +      
Sbjct: 92  RLRKQKQEAGSDTMIAVAGCVAQAEGAEIMRRAPVVDVVVGPQSYHRLPELLAEAKAGKR 151

Query: 145 ------PAHNPFTSL-VPDHGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVG 197
                 PA + F  L  P      +    A++ + EGC+  CTFC++P  RG  VSRPV 
Sbjct: 152 VVDTEFPAEDKFDHLPAPTRAATRSRGPAAFVTVQEGCDKFCTFCVVPYTRGAEVSRPVT 211

Query: 198 EIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGIW 257
           +I+ EA RL + GV+E+ +I Q+ +A+     H  G  +G     ++  L E L +M   
Sbjct: 212 KILDEAARLLDQGVREITLIGQNVNAF-----HGEG-PDGKV--WSLARLMERLAQMKGL 263

Query: 258 VRLHYVYPYPH---VDEIIPLMAEGKVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIK 314
            RL Y   +P     D I       +++PYL +P Q  S R+L  M R    +  L  I+
Sbjct: 264 ARLRYTTSHPRDMGEDLIAAHRDLPQLMPYLHLPVQSGSDRILAAMNRKHGRDLFLSLIE 323

Query: 315 KWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIED 374
           K R+  P+L + S FIVGFPGET+ DF+  LD ++E        FKYS   G  A E + 
Sbjct: 324 KMRDARPDLALSSDFIVGFPGETDRDFEDTLDLVREVGFASAYSFKYSSRPGTPAAEHDA 383

Query: 375 QIPEDVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLIDEVDEEGAIGRTYADAPEIDGL 434
           Q+ E+VK +R      + +   AA      G T  +L+++   +   G+    +P +  +
Sbjct: 384 QVAEEVKTERLAELQKLLEASKAAFDAACRGRTFDILLEKPGRQP--GQLIGRSPYLQSV 441

Query: 435 VYLNGETNLKPGELVNVVIEHADEYDLWG 463
           V  +    +  GEL+ V I       L G
Sbjct: 442 VVNDPPAGI--GELLTVTITDVGPNSLAG 468