Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) from Variovorax sp. SCN45

 Score =  160 bits (405), Expect = 8e-44
 Identities = 128/458 (27%), Positives = 216/458 (47%), Gaps = 47/458 (10%)

Query: 34  KIGFVSLGCPKNLVDSERILTQLRT-EGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTI 92
           K+   + GC  N  DS+++   L   +GYE   +  ++D+++ NTC   + A ++    +
Sbjct: 3   KVFIKTFGCQMNEYDSDKMADVLNAAQGYEPTQNVDEADLILFNTCSVREKAQEKVFSDL 62

Query: 93  GEA--LKENG-KVIVTGCLGAREDE-IRQVHPNVLGITGPHAYQNVLEHVHQYA----PK 144
           G    LK  G K+ V GC+ ++E + I    P V  + GP     + E ++       P+
Sbjct: 63  GRVKHLKAKGVKIGVGGCVASQEGQAIIARAPYVDIVFGPQTLHRLPEMLNDRERLDRPQ 122

Query: 145 -----PAHNPFTSLVPDHGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEI 199
                P    F  L P      T    A++ I EGC+  C++C++P  RG+ V+RP+ ++
Sbjct: 123 VDISFPEIEKFDHLPPARVEGAT----AFVSIMEGCSKYCSYCVVPYTRGEEVNRPLDDV 178

Query: 200 IGEAERLKNAGVKELLVISQDTSAYGV---DTKHSLGFANGSPVRHNIKALSEELGKMGI 256
           + E   L + GV+E+ ++ Q+ +AY     DT     FA           L E + ++  
Sbjct: 179 LVEIAGLADQGVREITLLGQNVNAYRGKMGDTAEIADFA----------LLIEYVAEIPG 228

Query: 257 WVRLHYVYPYPHVDEIIPLMAEG-----KVLPYLDIPFQHASPRVLKMMKRPGQAERTLE 311
             R+ Y   +P+  E  P + E      +++ +L +P QH S R+L  MKR   A     
Sbjct: 229 IERIRYTTSHPN--EFTPRLIEAYAKVPQLVSHLHLPVQHGSDRILMAMKRGYTAMEYKS 286

Query: 312 RIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANE 371
            ++K R I PEL + S FIVGFPGET++DF  ++  + + Q D    F +SP  G  A  
Sbjct: 287 TVRKLRAIRPELALSSDFIVGFPGETDDDFNKMMKLIDDCQFDASFSFIFSPRPGTPAAA 346

Query: 372 IEDQIPEDVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLIDEVDEEGA---IGRTYADA 428
           + D  P +VK  R      V         Q  +G+T +VL++    + A   +GRT  + 
Sbjct: 347 LHDDTPHEVKLARLHTLQAVIDANVKRFGQALVGTTQRVLVEGASRKDANELMGRTACNR 406

Query: 429 PEIDGLVYLNGETNLKPGELVNVVIEHADEYDLWGSIL 466
                +V   G+  L  G++ ++ I  +  Y L G ++
Sbjct: 407 -----VVNFEGDARL-VGQMTDLRITRSLAYTLRGEVV 438