Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) from Variovorax sp. SCN45

 Score =  554 bits (1428), Expect = e-162
 Identities = 280/461 (60%), Positives = 342/461 (74%), Gaps = 21/461 (4%)

Query: 21  IAEQSQNSQTTGNKIGFVSLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGF 80
           +A   + +  T  K+GFVSLGCPK L DSE ILTQL  EGY+   ++  +D+VIVNTCGF
Sbjct: 4   VASPERTATPTAPKVGFVSLGCPKALTDSELILTQLSAEGYQTAKTFEGADLVIVNTCGF 63

Query: 81  IDSAVQESLDTIGEALKENGKVIVTGCLGAREDE-----IRQVHPNVLGITGPHAYQNVL 135
           ID AV+ESLDTIGEAL ENG+VIVTGCLGA+  +     +RQ+HP+VL +TGPHA Q V+
Sbjct: 64  IDDAVKESLDTIGEALAENGRVIVTGCLGAKTGDQGGNLVRQMHPSVLAVTGPHATQEVM 123

Query: 136 EHVHQYAPKPAHNPFTSLVPDH----GVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDL 191
           + VH   PKP H+PF  LVP+     G+KLTP+HYAYLKISEGCNHRCTFCIIPSMRGDL
Sbjct: 124 DAVHANLPKP-HDPFIDLVPNTFGVAGLKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDL 182

Query: 192 VSRPVGEIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEEL 251
           VSRPVG+++ EA+ L   GVKELLVISQDTSAYGVD K+  GF +G PV+  +  L   L
Sbjct: 183 VSRPVGDVLSEAKALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLELVRTL 242

Query: 252 GKM----GIWVRLHYVYPYPHVDEIIPLMAEGKVLPYLDIPFQHASPRVLKMMKRPGQAE 307
           G++    G WVRLHYVYPYP VDE+IPLMA G+VLPYLD+P QH+ P VLK MKRP   E
Sbjct: 243 GEIAEPYGAWVRLHYVYPYPSVDEVIPLMASGQVLPYLDVPLQHSHPDVLKRMKRPASGE 302

Query: 308 RTLERIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGA 367
           + LER+ +WRE+CPELVIRSTFI GFPGETE++F+ LLD+++EA++DR GCF YSPVEGA
Sbjct: 303 KNLERLARWREVCPELVIRSTFIAGFPGETEQEFEHLLDFIREAEIDRAGCFAYSPVEGA 362

Query: 368 AANEIEDQIPEDVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLIDE---VDEEGAIGRT 424
            AN+I   +PE  ++ R  RFM V + +S AKLQ+RIGSTMQVL+D    +  +G +GRT
Sbjct: 363 TANDIPGMLPEPEREARRARFMEVAEAVSIAKLQRRIGSTMQVLVDSAPGLGRKGGVGRT 422

Query: 425 YADAPEIDGLVYL----NGETNLKPGELVNVVIEHADEYDL 461
           YADAPEIDG V L         LK GE     I  A+ +DL
Sbjct: 423 YADAPEIDGTVRLLPPEKISKTLKVGEFTRARIVGAEGHDL 463