Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) from Sphingobium sp. HT1-2

 Score =  540 bits (1391), Expect = e-158
 Identities = 271/445 (60%), Positives = 341/445 (76%), Gaps = 17/445 (3%)

Query: 34  KIGFVSLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIG 93
           KIG VSLGCPKNLVDSERILT+LR++GY++   Y  +DVV+VNTCGF+DSA +ESL+ IG
Sbjct: 15  KIGMVSLGCPKNLVDSERILTKLRSDGYQMSADYAGADVVLVNTCGFLDSAKEESLEAIG 74

Query: 94  EALKENGKVIVTGCLGAREDEIRQVHPNVLGITGPHAYQNVLEHVHQYAPKPAHNPFTSL 153
           EA+ ENG+VIVTGC+G   D IR   P VL +TG H Y+ V+  VH  +P P  N F  L
Sbjct: 75  EAMAENGRVIVTGCMGDEADVIRAKFPQVLAVTGAHQYEQVVNAVHDASP-PIPNAFVDL 133

Query: 154 VPDHGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAERLKNAGVKE 213
           VP+ G+KLTP+HY+YLKISEGCNHRC+FCIIPS+RGDLVSR +  ++ EAE+L  AG KE
Sbjct: 134 VPEGGLKLTPRHYSYLKISEGCNHRCSFCIIPSIRGDLVSRRIDAVLREAEKLVAAGTKE 193

Query: 214 LLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKM----GI--WVRLHYVYPYP 267
           LLVISQDTSAYGVDT+H      G  VR ++  ++ ELG++    G+  WVRLHYVYPYP
Sbjct: 194 LLVISQDTSAYGVDTRHEPRMWKGREVRAHMTDMARELGQLRTADGVAPWVRLHYVYPYP 253

Query: 268 HVDEIIPLMAEGKVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPELVIRS 327
           HVD +IPLMAEG + PYLDIPFQHASP VLK MKRP    + L+RI+KWR+ICP++ IRS
Sbjct: 254 HVDHVIPLMAEGLLTPYLDIPFQHASPSVLKAMKRPANEAKVLDRIRKWRDICPDIAIRS 313

Query: 328 TFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVKQDRFER 387
           +F+VGFPGETE DFQ LLDWL EAQLDRVG F++ PVEGAAAN++   +PE+VK++R++R
Sbjct: 314 SFVVGFPGETEADFQYLLDWLDEAQLDRVGAFRFEPVEGAAANDLPGAVPEEVKEERYQR 373

Query: 388 FMLVQQEISAAKLQKRIGSTMQVLIDEV----DEEGAIG---RTYADAPEIDGLVYLN-- 438
            M     ISAAKLQ ++G  M V+IDEV    +E+G+IG   R+ ADAPEIDG V+L   
Sbjct: 374 IMEKTAAISAAKLQAKVGRVMPVIIDEVGEPDEEDGSIGATARSQADAPEIDGNVFLRDV 433

Query: 439 GETNLKPGELVNVVIEHADEYDLWG 463
           GE   K G++ +V+IE AD++DL+G
Sbjct: 434 GE-GRKAGDMFDVLIEDADDHDLYG 457