Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase from Magnetospirillum magneticum AMB-1

 Score =  171 bits (434), Expect = 3e-47
 Identities = 121/395 (30%), Positives = 188/395 (47%), Gaps = 38/395 (9%)

Query: 41  GCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGEALK--- 97
           GC  N+ DS R+   L   GY   +   ++D+VI+NTC   + A ++    +G   K   
Sbjct: 11  GCQMNVYDSARMADVLAPLGYGPADHAEEADMVILNTCHIREKAAEKVFSELGRLRKLQA 70

Query: 98  ----ENGKVI--VTGCLGARE-DEIRQVHPNVLGITGPHAYQNVLEHVHQYAPK------ 144
                 G++I  V GC+   E +EI +  P V  + GP  Y  + E V Q A        
Sbjct: 71  AKAEAGGRMILAVAGCVAQAEGEEILRRAPFVDIVLGPQTYHRLPEMVAQAARAGGAVLD 130

Query: 145 ---PAHNPFTSLVPDHGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIG 201
              PA   F  L   H    +    A+L + EGC+  CTFC++P  RG   SRP   ++ 
Sbjct: 131 TEFPAEPKFDFLPEPHAEGTS----AFLSVQEGCDKFCTFCVVPYTRGAEYSRPAAAVLA 186

Query: 202 EAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGIWVRLH 261
           EA  L   GV+E+ ++ Q+ + +       LG          I+AL+E  G      R+ 
Sbjct: 187 EAATLAAGGVREITLLGQNVNGWHGGEGWGLG--------RLIRALAEVEGVE----RIR 234

Query: 262 YVYPYPHV--DEIIPLMAE-GKVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWRE 318
           Y   +P    DE+I   AE  +++P+L +P Q  S R+L  M R    +  L  + K + 
Sbjct: 235 YTTSHPRDMDDELIRAHAELPQLMPFLHLPVQSGSDRILAAMNRGHDRDTYLRLVDKLKS 294

Query: 319 ICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPE 378
            CP+L + S FIVGFPGE++ DF+  +D ++     +   FKYSP  G  A  +E Q+PE
Sbjct: 295 ACPDLALSSDFIVGFPGESDADFEASMDLIRRVGFVQTYSFKYSPRPGTPAAAMETQVPE 354

Query: 379 DVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLID 413
            VK +R  +   +  + +       +G  M++L+D
Sbjct: 355 AVKDERLAQVQALLLDQTMRFNHACVGREMRILLD 389