Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Escherichia coli ECRC62

 Score =  149 bits (376), Expect = 2e-40
 Identities = 125/460 (27%), Positives = 217/460 (47%), Gaps = 47/460 (10%)

Query: 34  KIGFVSLGCPKNLVDSERILTQL-RTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTI 92
           K+   + GC  N  DS ++   L  T GY++ +   ++DV+++NTC   + A ++    +
Sbjct: 4   KLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQL 63

Query: 93  G--EALKENGKVIVTG---CLGAREDE-IRQVHPNVLGITGPHAYQNVLEHVHQYAPK-- 144
           G  + LKE    ++ G   C+ ++E E IRQ    V  I GP     + E ++       
Sbjct: 64  GRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRGDRS 123

Query: 145 -------PAHNPFTSLVPDHGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVG 197
                  P    F  L        T    A++ I EGCN  CT+C++P  RG+ VSRP  
Sbjct: 124 PVVDISFPEIEKFDRLPEPRAEGPT----AFVSIMEGCNKYCTYCVVPYTRGEEVSRPSD 179

Query: 198 EIIGEAERLKNAGVKELLVISQDTSAY-GVDTKHSLG-FANGSPVRHNIKALSEELGKMG 255
           +I+ E  +L   GV+E+ ++ Q+ +A+ G +   + G FAN   +   I  +        
Sbjct: 180 DILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFANLLRLVAAIDGIDR------ 233

Query: 256 IWVRLHYVYPYPHVDEIIPLMAEG-KVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIK 314
             +R    +P    D+II +  +  +++ +L +P Q  S R+L +M R   A      I+
Sbjct: 234 --IRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIR 291

Query: 315 KWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIED 374
           K R   P++ I S FIVGFPGET EDF+  +  + +   D    F +S   G  A ++ D
Sbjct: 292 KLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVD 351

Query: 375 QIPEDVKQDRFERFMLVQQEISAAKL---QKRIGSTMQVLIDEVDEEGAI---GRT---- 424
            +PE+ K+   +R  ++Q+ I+   +   ++ +G+T ++L++    +  +   GRT    
Sbjct: 352 DVPEEEKK---QRLYILQERINQQAMAWSRRMLGTTQRILVEGTSRKSIMELSGRTENNR 408

Query: 425 ---YADAPEIDGLVYLNGETNLKPGELVNVVIEHADEYDL 461
              +   P++ G       T++ P  L   V+   DE  L
Sbjct: 409 VVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGL 448