Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., tRNA 2-methylthioadenosine synthase-like protein from Caulobacter crescentus NA1000 Δfur

 Score =  130 bits (327), Expect = 9e-35
 Identities = 104/387 (26%), Positives = 180/387 (46%), Gaps = 27/387 (6%)

Query: 35  IGFVSLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGE 94
           +  V+ GC  N  +SE +  +   +G         SD V+ NTC   + AV+++   I +
Sbjct: 33  VDVVTFGCRLNAYESEAMRARASADGL--------SDAVVFNTCAVTNEAVRQARQAIRK 84

Query: 95  ALKEN--GKVIVTGCLGAREDEIRQVHPNVLGITGPHAYQNVLEHVHQYAPKPAHNPFTS 152
           A +E    ++IVTGC    +       P V  + G +A +     +   + +   N   S
Sbjct: 85  ARRERPGARIIVTGCAAQVDPAAFAAMPEVDLVLG-NAEKAAPGALTDTSTRVRVNDIMS 143

Query: 153 LVPDHGVK---LTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAERLKNA 209
           +    G     L  +  AY+++  GC+HRCTFCIIP  RG+  S P GE++ +  +L   
Sbjct: 144 IKETAGHLIDGLKDRARAYVEVQNGCDHRCTFCIIPYGRGNSRSAPAGEVVEQVRKLAAE 203

Query: 210 GVKELLVISQDTSAYGVDT--KHSLGFANGSPVRHNIKALSEELGKMGIWVRLHYVYPYP 267
           G +E+++   D +++G D   + +LG   G  +R     +  +L ++    RL  +    
Sbjct: 204 GYREVVLTGVDVTSWGADLPGQPTLGQLVGRILR-----MVPDLPRL----RLSSIDAAE 254

Query: 268 HVDEIIPLM-AEGKVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPELVIR 326
              ++  L+  E +++PYL +  Q     +LK MKR    E  L+ + + R + P+    
Sbjct: 255 IDPDLFKLLETEPRLMPYLHLSLQAGDNLILKRMKRRHSREDALKLVAEVRRVRPDTAFG 314

Query: 327 STFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVKQDRFE 386
           +  I GFP ET+E F+  L  ++EA L  +  F YS   G  A  +   +   V +DR  
Sbjct: 315 ADLIAGFPTETDEAFENTLKLVEEAGLAFLHVFPYSARPGTPAARM-PPVKGPVIKDRAR 373

Query: 387 RFMLVQQEISAAKLQKRIGSTMQVLID 413
           R     Q      LQ+++G  +  L++
Sbjct: 374 RLREAGQRGLERHLQRQVGRVLSGLVE 400