Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., miaB protein from Agrobacterium fabrum C58

 Score =  182 bits (461), Expect = 3e-50
 Identities = 143/476 (30%), Positives = 233/476 (48%), Gaps = 56/476 (11%)

Query: 21  IAEQSQNSQTTGNKIGFVSLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGF 80
           IA +  NS+    K+   + GC  N+ DS R+   L  +GY       ++D+V++NTC  
Sbjct: 2   IAREGSNSR----KVFIKTYGCQMNVYDSVRMSDALAKDGYVQTEDMGEADLVLLNTCHI 57

Query: 81  IDSAVQESLDTIG------EALKENGK---VIVTGCLGARE-DEIRQVHPNVLGITGPHA 130
            + A ++    +G      ++ +E G+   + V GC+   E +EI +  P V  + GP  
Sbjct: 58  REKAAEKVYSALGRLRDMKKSREEQGREFMIGVAGCVAQAEGEEILRRAPAVDVVIGPQT 117

Query: 131 Y-------------QNVLEHVHQYAPKPAHNPFTSLVPDHGVKLTPKHYAYLKISEGCNH 177
           Y             + V+E  +    K  H P           +T    A+L + EGC+ 
Sbjct: 118 YHRLPDALKRVRRGERVIETEYAVEDKFEHLPVAEKATLRSRGVT----AFLTVQEGCDK 173

Query: 178 RCTFCIIPSMRGDLVSRPVGEIIGEAERLKNAGVKELLVISQDTSAY-GVDTKHSLGFAN 236
            CTFC++P  RG  VSRPV +I+ EA +L +AGV+E+ ++ Q+ +A+ G   K       
Sbjct: 174 FCTFCVVPYTRGSEVSRPVRQIVDEAMKLVDAGVREITLLGQNVNAWQGEGPKGE----- 228

Query: 237 GSPVRHNIKALSEELGKMGIWVRLHYVYPYPHV--DEIIPLMAEGKVL-PYLDIPFQHAS 293
               +  +  L   L ++    RL Y   +P    D +I    + ++L PYL +P Q  S
Sbjct: 229 ----KWGLAELLYRLAEIPGLARLRYTTSHPRDMDDRLIGAHRDLRILMPYLHLPVQSGS 284

Query: 294 PRVLKMMKRPGQAERTLERIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQL 353
            R+LK M R    E  ++ I+K R   P++ +   FIVGFPGET+ DF+  +  ++  + 
Sbjct: 285 DRILKAMNRRHTGEEYIQLIEKIRSARPDIAMSGDFIVGFPGETDRDFEDTMAMVETVKY 344

Query: 354 DRVGCFKYSPVEGAAANEIEDQIPEDVKQDRFERF--MLVQQEISAAKLQKRIGSTMQVL 411
            +   FKYS   G    ++ DQ+ EDVK +R ER   +L++Q+   A  +  +G TM VL
Sbjct: 345 AQAFSFKYSTRPGTPGADLTDQVAEDVKAERLERLQALLLRQQKEFA--ESLVGKTMDVL 402

Query: 412 IDEVDE--EGAIGRTYADAPEIDGLVYLNGETNLKPGELVNVVIEHADEYDLWGSI 465
           +++     E  IGR    +P +   V L+ +T LK G++VNV I       L+  +
Sbjct: 403 LEKPGRMPEQLIGR----SPWLQS-VNLDAKT-LKIGDIVNVRITATGPNSLFAEV 452